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Meta-analysis of genome-wide associations studies confirms a susceptibility locus for knee osteoarthritis on chromosome 7q22

Meta-analysis of genome-wide associations studies confirms a susceptibility locus for knee osteoarthritis on chromosome 7q22
Meta-analysis of genome-wide associations studies confirms a susceptibility locus for knee osteoarthritis on chromosome 7q22
Objectives Osteoarthritis (OA) is the most prevalent form of arthritis and accounts for substantial morbidity and disability, particularly in older people. It is characterised by changes in joint structure, including degeneration of the articular cartilage, and its aetiology is multifactorial with a strong postulated genetic component.

Methods A meta-analysis was performed of four genome-wide association (GWA) studies of 2371 cases of knee OA and 35 909 controls in Caucasian populations. Replication of the top hits was attempted with data from 10 additional replication datasets.

Results With a cumulative sample size of 6709 cases and 44 439 controls, one genome-wide significant locus was identified on chromosome 7q22 for knee OA (rs4730250, p=9.2×10?9), thereby confirming its role as a susceptibility locus for OA.

Conclusion The associated signal is located within a large (500 kb) linkage disequilibrium block that contains six genes: PRKAR2B (protein kinase, cAMP-dependent, regulatory, type II, ?), HPB1 (HMG-box transcription factor 1), COG5 (component of oligomeric golgi complex 5), GPR22 (G protein-coupled receptor 22), DUS4L (dihydrouridine synthase 4-like) and BCAP29 (B cell receptor-associated protein 29). Gene expression analyses of the (six) genes in primary cells derived from different joint tissues confirmed expression of all the genes in the joint environment.

0003-4967
349-355
Evangelou, Evangelos
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Valdes, Ana M.
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Panoutsopoulou, Kalliope
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van der Putte, Tom
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Ralston, Stuart H.
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Rivadeneira, Fernado
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Shi, Dongquan
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arcOGEN Consortium
Evangelou, Evangelos
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Valdes, Ana M.
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Kerkhof, Hanneke J.
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Styrkarsdottir, Unnur
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Zhu, YanYan
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Meulenbelt, Ingrid
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Lories, Rik J.
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Karassa, Fontini B.
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Tylzanowski, Przemko
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Carr, Andrew
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Chapman, Kay
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Dai, Jin
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Deloukas, Panos
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Doherty, Sally
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Halldorsson, Bjarni V.
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Hammond, Christina L.
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Hart, Deborah J.
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Jiang, Qing
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Mabuchi, Akihiko
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McCaskie, Andrew
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Nakajima, Masahiro
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Nillson, Peter M.
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Rivadeneira, Fernado
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Saarela, Janna
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Evangelou, Evangelos, Valdes, Ana M., Kerkhof, Hanneke J., Styrkarsdottir, Unnur, Zhu, YanYan, Meulenbelt, Ingrid, Lories, Rik J., Karassa, Fontini B., Tylzanowski, Przemko, Bos, Steffan D., Akune, Toru, Arden, Nigel K., Carr, Andrew, Chapman, Kay, Cupples, L. Adrienne, Dai, Jin, Deloukas, Panos, Doherty, Sally, Engstrom, Gunnar, Gonzalez, Antonio, Halldorsson, Bjarni V., Hammond, Christina L., Hart, Deborah J., Helgadottir, Hafdis, Hofman, Albert, Ikegawa, Shiro, Ingvasson, Thorvaldur, Jiang, Qing, Jonsson, Helgi, Kaprio, Jaakko, Kawaguchi, Hiroshi, Kisand, Kalle, Kloppenburg, Margreet, Kujala, Urho M., Lohmander, L. Stefan, Loughlin, John, Luyten, Frank P., Mabuchi, Akihiko, McCaskie, Andrew, Nakajima, Masahiro, Nillson, Peter M., Nishida, Nao, Ollier, William E., Panoutsopoulou, Kalliope, van der Putte, Tom, Ralston, Stuart H., Rivadeneira, Fernado, Saarela, Janna, Schulte-Merker, Stefan and Shi, Dongquan , arcOGEN Consortium (2011) Meta-analysis of genome-wide associations studies confirms a susceptibility locus for knee osteoarthritis on chromosome 7q22. Annals of the Rheumatic Diseases, 70 (2), 349-355. (doi:10.1136/ard.2010.132787). (PMID:21068099)

Record type: Article

Abstract

Objectives Osteoarthritis (OA) is the most prevalent form of arthritis and accounts for substantial morbidity and disability, particularly in older people. It is characterised by changes in joint structure, including degeneration of the articular cartilage, and its aetiology is multifactorial with a strong postulated genetic component.

Methods A meta-analysis was performed of four genome-wide association (GWA) studies of 2371 cases of knee OA and 35 909 controls in Caucasian populations. Replication of the top hits was attempted with data from 10 additional replication datasets.

Results With a cumulative sample size of 6709 cases and 44 439 controls, one genome-wide significant locus was identified on chromosome 7q22 for knee OA (rs4730250, p=9.2×10?9), thereby confirming its role as a susceptibility locus for OA.

Conclusion The associated signal is located within a large (500 kb) linkage disequilibrium block that contains six genes: PRKAR2B (protein kinase, cAMP-dependent, regulatory, type II, ?), HPB1 (HMG-box transcription factor 1), COG5 (component of oligomeric golgi complex 5), GPR22 (G protein-coupled receptor 22), DUS4L (dihydrouridine synthase 4-like) and BCAP29 (B cell receptor-associated protein 29). Gene expression analyses of the (six) genes in primary cells derived from different joint tissues confirmed expression of all the genes in the joint environment.

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Published date: February 2011

Identifiers

Local EPrints ID: 177871
URI: http://eprints.soton.ac.uk/id/eprint/177871
ISSN: 0003-4967
PURE UUID: e263b8ff-ee70-46f9-a47c-99ca822e3346

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Date deposited: 21 Mar 2011 15:55
Last modified: 14 Mar 2024 02:44

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Contributors

Author: Evangelos Evangelou
Author: Ana M. Valdes
Author: Hanneke J. Kerkhof
Author: Unnur Styrkarsdottir
Author: YanYan Zhu
Author: Ingrid Meulenbelt
Author: Rik J. Lories
Author: Fontini B. Karassa
Author: Przemko Tylzanowski
Author: Steffan D. Bos
Author: Toru Akune
Author: Nigel K. Arden
Author: Andrew Carr
Author: Kay Chapman
Author: L. Adrienne Cupples
Author: Jin Dai
Author: Panos Deloukas
Author: Sally Doherty
Author: Gunnar Engstrom
Author: Antonio Gonzalez
Author: Bjarni V. Halldorsson
Author: Christina L. Hammond
Author: Deborah J. Hart
Author: Hafdis Helgadottir
Author: Albert Hofman
Author: Shiro Ikegawa
Author: Thorvaldur Ingvasson
Author: Qing Jiang
Author: Helgi Jonsson
Author: Jaakko Kaprio
Author: Hiroshi Kawaguchi
Author: Kalle Kisand
Author: Margreet Kloppenburg
Author: Urho M. Kujala
Author: L. Stefan Lohmander
Author: John Loughlin
Author: Frank P. Luyten
Author: Akihiko Mabuchi
Author: Andrew McCaskie
Author: Masahiro Nakajima
Author: Peter M. Nillson
Author: Nao Nishida
Author: William E. Ollier
Author: Kalliope Panoutsopoulou
Author: Tom van der Putte
Author: Stuart H. Ralston
Author: Fernado Rivadeneira
Author: Janna Saarela
Author: Stefan Schulte-Merker
Author: Dongquan Shi
Corporate Author: arcOGEN Consortium

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