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Genome-wide DNA profiling better defines the prognosis of chronic lymphocytic leukaemia

Genome-wide DNA profiling better defines the prognosis of chronic lymphocytic leukaemia
Genome-wide DNA profiling better defines the prognosis of chronic lymphocytic leukaemia
The integration of molecular and clinical information to tailor treatments remains an important research challenge in chronic lymphocytic leukaemia (CLL). This study aimed to identify genomic lesions associated with a poor outcome and a higher risk of histological transformation. A mono-institutional cohort of 147 cases was used as the test series, and a multi-institutional cohort of 176 cases as a validation series. Genomic profiles were obtained using Affymetrix SNP 6.0. The impact of the recurrent minimal common regions (MCRs) on overall survival was evaluated by univariate analysis followed by multiple-test correction. The independent prognostic significance was assessed by multivariate analysis. Eight MCRs showed a prognostic impact: gains at 2p25.3-p22.3 (MYCN), 2p22.3, 2p16.2-p14 (REL), 8q23.3-q24.3 (MYC), losses at 8p23.1-p21.2, 8p21.2, and of the TP53 locus. Gains at 2p and 8q and TP53 inactivation maintained prognostic significance in multivariate analysis and a hierarchical model confirmed their relevance. Gains at 2p also determined a higher risk of Richter syndrome transformation. The prediction of outcome for CLL patients might be improved by evaluating the presence of gains at 2p and 8q as novel genomic regions besides those included in the 'standard' fluorescence in situ hybridization panel.
leukaemia, prognostic factors, richter’s syndrome, transformation, affymetrix
0007-1048
590-599
Rinaldi, Andrea
ae4d2559-25e9-47b8-8c77-308f6cb2a5c4
Mian, Michael
faa8dc8b-d514-486b-9d6d-b045598381e3
Kwee, Ivo
0926a658-8296-4ba4-9a70-abcf8a1aad96
Rossi, Davide
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Deambrogi, Clara
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Mensah, Afua A
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Forconi, Francesco
ce9ed873-58cf-4876-bf3a-9ba1d163edc8
Spina, Valeria
bb72602d-3d56-424f-b169-47377aef1d10
Cencini, Emanuele
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Drandi, Daniela
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Ladetto, Marco
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Santachiara, Rita
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Marasca, Roberto
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Gattei, Valter
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Cavalli, Franco
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Zucca, Emanuele
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Gaidano, Gianluca
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Bertoni, Francesco
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Rinaldi, Andrea
ae4d2559-25e9-47b8-8c77-308f6cb2a5c4
Mian, Michael
faa8dc8b-d514-486b-9d6d-b045598381e3
Kwee, Ivo
0926a658-8296-4ba4-9a70-abcf8a1aad96
Rossi, Davide
b4b2506d-794c-4c79-8b2d-6767554fd52a
Deambrogi, Clara
c7d10651-681c-41b9-97b6-bf68f3c1243d
Mensah, Afua A
099aa635-665c-4c17-8ad0-325a8339ef98
Forconi, Francesco
ce9ed873-58cf-4876-bf3a-9ba1d163edc8
Spina, Valeria
bb72602d-3d56-424f-b169-47377aef1d10
Cencini, Emanuele
3dc5d188-96b0-4f7d-abb8-af4d22638d7e
Drandi, Daniela
819ad430-52ed-4409-8e81-26a3b12d3adf
Ladetto, Marco
eb383970-9337-4c08-818d-d77ce9884036
Santachiara, Rita
01785ae1-62f5-4fc1-bc58-103edb32d39e
Marasca, Roberto
918148d0-8f99-4a29-8322-1b34f6d7dd00
Gattei, Valter
df828ae8-1b40-4acb-8908-5a6b3d16cf99
Cavalli, Franco
ce699517-7deb-4bad-8b14-afe749884b9e
Zucca, Emanuele
40bd5950-d74e-4169-a2ea-0bfc1058058e
Gaidano, Gianluca
1a6a7107-107b-4891-82e0-5fedadd2f65a
Bertoni, Francesco
13297a2f-854a-4841-a410-d6bfca8afee8

Rinaldi, Andrea, Mian, Michael, Kwee, Ivo, Rossi, Davide, Deambrogi, Clara, Mensah, Afua A, Forconi, Francesco, Spina, Valeria, Cencini, Emanuele, Drandi, Daniela, Ladetto, Marco, Santachiara, Rita, Marasca, Roberto, Gattei, Valter, Cavalli, Franco, Zucca, Emanuele, Gaidano, Gianluca and Bertoni, Francesco (2011) Genome-wide DNA profiling better defines the prognosis of chronic lymphocytic leukaemia. British Journal of Haematology, 154 (5), 590-599. (doi:10.1111/j.1365-2141.2011.08789.x). (PMID:21749360)

Record type: Article

Abstract

The integration of molecular and clinical information to tailor treatments remains an important research challenge in chronic lymphocytic leukaemia (CLL). This study aimed to identify genomic lesions associated with a poor outcome and a higher risk of histological transformation. A mono-institutional cohort of 147 cases was used as the test series, and a multi-institutional cohort of 176 cases as a validation series. Genomic profiles were obtained using Affymetrix SNP 6.0. The impact of the recurrent minimal common regions (MCRs) on overall survival was evaluated by univariate analysis followed by multiple-test correction. The independent prognostic significance was assessed by multivariate analysis. Eight MCRs showed a prognostic impact: gains at 2p25.3-p22.3 (MYCN), 2p22.3, 2p16.2-p14 (REL), 8q23.3-q24.3 (MYC), losses at 8p23.1-p21.2, 8p21.2, and of the TP53 locus. Gains at 2p and 8q and TP53 inactivation maintained prognostic significance in multivariate analysis and a hierarchical model confirmed their relevance. Gains at 2p also determined a higher risk of Richter syndrome transformation. The prediction of outcome for CLL patients might be improved by evaluating the presence of gains at 2p and 8q as novel genomic regions besides those included in the 'standard' fluorescence in situ hybridization panel.

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More information

e-pub ahead of print date: 12 July 2011
Published date: September 2011
Keywords: leukaemia, prognostic factors, richter’s syndrome, transformation, affymetrix
Organisations: Cancer Sciences

Identifiers

Local EPrints ID: 358119
URI: http://eprints.soton.ac.uk/id/eprint/358119
ISSN: 0007-1048
PURE UUID: e80ffe85-f16e-452d-9f45-22cd7c297184
ORCID for Francesco Forconi: ORCID iD orcid.org/0000-0002-2211-1831

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Date deposited: 04 Oct 2013 13:05
Last modified: 15 Mar 2024 03:40

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Contributors

Author: Andrea Rinaldi
Author: Michael Mian
Author: Ivo Kwee
Author: Davide Rossi
Author: Clara Deambrogi
Author: Afua A Mensah
Author: Valeria Spina
Author: Emanuele Cencini
Author: Daniela Drandi
Author: Marco Ladetto
Author: Rita Santachiara
Author: Roberto Marasca
Author: Valter Gattei
Author: Franco Cavalli
Author: Emanuele Zucca
Author: Gianluca Gaidano
Author: Francesco Bertoni

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