The University of Southampton
University of Southampton Institutional Repository

Risk of ovarian cancer and the NF- B pathway: genetic association with IL1A and TNFSF10

Risk of ovarian cancer and the NF- B pathway: genetic association with IL1A and TNFSF10
Risk of ovarian cancer and the NF- B pathway: genetic association with IL1A and TNFSF10
A missense single-nucleotide polymorphism (SNP) in the immune modulatory gene IL1A has been associated with ovarian cancer risk (rs17561). Although the exact mechanism through which this SNP alters risk of ovarian cancer is not clearly understood, rs17561 has also been associated with risk of endometriosis, an epidemiologic risk factor for ovarian cancer. Interleukin-1? (IL1A) is both regulated by and able to activate NF-?B, a transcription factor family that induces transcription of many proinflammatory genes and may be an important mediator in carcinogenesis. We therefore tagged SNPs in more than 200 genes in the NF-?B pathway for a total of 2,282 SNPs (including rs17561) for genotype analysis of 15,604 cases of ovarian cancer in patients of European descent, including 6,179 of high-grade serous (HGS), 2,100 endometrioid, 1,591 mucinous, 1,034 clear cell, and 1,016 low-grade serous, including 23,235 control cases spanning 40 studies in the Ovarian Cancer Association Consortium. In this large population, we confirmed the association between rs17561 and clear cell ovarian cancer [OR, 0.84; 95% confidence interval (CI), 0.76-0.93; P = 0.00075], which remained intact even after excluding participants in the prior study (OR, 0.85; 95% CI, 0.75-0.95; P = 0.006). Considering a multiple-testing-corrected significance threshold of P < 2.5 × 10(-5), only one other variant, the TNFSF10 SNP rs6785617, was associated significantly with a risk of ovarian cancer (low malignant potential tumors OR, 0.85; 95% CI, 0.79-0.91; P = 0.00002). Our results extend the evidence that borderline tumors may have a distinct genetic etiology. Further investigation of how these SNPs might modify ovarian cancer associations with other inflammation-related risk factors is warranted
0008-5472
852-861
Charbonneau, B.
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Block, M.S.
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Bamlet, W.R.
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Vierkant, R.A.
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Kalli, K.R.
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Fogarty, Z.
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Salvesen, H.B.
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Kiemeney, L.A.
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Baglietto, L.
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Giles, G.G.
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Trabert, B.
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Sieh, W.
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Bandera, E.V.
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Orlow, I.
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Terry, K.
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Goodman, M.T.
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Thompson, P.J.
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Pejovic, T.
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Bogdanova, N.
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Runnebaum, I.B.
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Paul, J.
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Wu, A.H.
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Hogdall, E.
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Heitz, F.
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Levine, D.A.
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Kjaer, S.K.
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Cramer, D.
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Flanagan, J.M.
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Phelan, C.M.
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Brown, R.
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Massuger, L.F.A.G.
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Song, H.
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Doherty, J.A.
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Krakstad, C.
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Liang, D.
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Odunsi, K.
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Berchuck, A.
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Jensen, A.
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Lubinski, J.
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Nevanlinna, H.
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Lurie, G.
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Ziogas, A.
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Walsh, C.
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Despierre, E.
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Brinton, L.
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Hein, A.
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Rudolph, A.
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Dansonka-Mieszkowska, A.
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Brooks-Wilson, A.
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du Bois, A.
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Szafron, L.M.
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Lambrechts, S.
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Yang, H.
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van den Berg, D.
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Halle, M.K.
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Pejovic, T.
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Le, N.D.
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Bunker, C.H.
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Bogdanova, N.
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Runnebaum, I.B.
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Cramer, D.
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Brown, R.
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Liang, D.
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Odunsi, K.
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Berchuck, A.
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Jensen, A.
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Lubinski, J.
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Nevanlinna, H.
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Lurie, G.
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Ziogas, A.
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Walsh, C.
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Despierre, E.
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Brinton, L.
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Rudolph, A.
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Dansonka-Mieszkowska, A.
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Olson, S.H.
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Harter, P.
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Tyrer, J.
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Vitonis, A.F.
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Brooks-Wilson, A.
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Pike, M.C.
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Ramus, S.J.
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Wik, E.
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Cybulski, C.
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Lin, J.
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Sucheston, L.
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Edwards, R.
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McGuire, V.
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Lester, J.
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du Bois, A.
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Lundvall, L.
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Szafron, L.M.
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Lambrechts, S.
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Beckmann, M.W.
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Pelttari, L.M.
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Van Altena, A.M.
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van den Berg, D.
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Halle, M.K.
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Gentry-Maharaj, A.
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Schwaab, I.
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Chandran, U.
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Menkiszak, J.
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Ekici, A.B.
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Wilkens, L.R.
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Modugno, F.
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Friel, G.
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Rothstein, J.H.
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Vergote, I.
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Garcia-Closas, M.
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Hildebrandt, M.A.T.
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Charbonneau, B., Block, M.S. and Bamlet, W.R. et al. (2014) Risk of ovarian cancer and the NF- B pathway: genetic association with IL1A and TNFSF10. Cancer Research, 74 (3), 852-861. (doi:10.1158/0008-5472.CAN-13-1051). (PMID:24272484)

Record type: Article

Abstract

A missense single-nucleotide polymorphism (SNP) in the immune modulatory gene IL1A has been associated with ovarian cancer risk (rs17561). Although the exact mechanism through which this SNP alters risk of ovarian cancer is not clearly understood, rs17561 has also been associated with risk of endometriosis, an epidemiologic risk factor for ovarian cancer. Interleukin-1? (IL1A) is both regulated by and able to activate NF-?B, a transcription factor family that induces transcription of many proinflammatory genes and may be an important mediator in carcinogenesis. We therefore tagged SNPs in more than 200 genes in the NF-?B pathway for a total of 2,282 SNPs (including rs17561) for genotype analysis of 15,604 cases of ovarian cancer in patients of European descent, including 6,179 of high-grade serous (HGS), 2,100 endometrioid, 1,591 mucinous, 1,034 clear cell, and 1,016 low-grade serous, including 23,235 control cases spanning 40 studies in the Ovarian Cancer Association Consortium. In this large population, we confirmed the association between rs17561 and clear cell ovarian cancer [OR, 0.84; 95% confidence interval (CI), 0.76-0.93; P = 0.00075], which remained intact even after excluding participants in the prior study (OR, 0.85; 95% CI, 0.75-0.95; P = 0.006). Considering a multiple-testing-corrected significance threshold of P < 2.5 × 10(-5), only one other variant, the TNFSF10 SNP rs6785617, was associated significantly with a risk of ovarian cancer (low malignant potential tumors OR, 0.85; 95% CI, 0.79-0.91; P = 0.00002). Our results extend the evidence that borderline tumors may have a distinct genetic etiology. Further investigation of how these SNPs might modify ovarian cancer associations with other inflammation-related risk factors is warranted

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Accepted/In Press date: 27 September 2013
e-pub ahead of print date: 22 November 2013
Published date: 1 February 2014
Organisations: Cancer Sciences

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Local EPrints ID: 382780
URI: http://eprints.soton.ac.uk/id/eprint/382780
ISSN: 0008-5472
PURE UUID: 9993b69c-5540-4857-8e74-52581e2cd376
ORCID for D. Eccles: ORCID iD orcid.org/0000-0002-9935-3169

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Date deposited: 12 Oct 2015 13:39
Last modified: 15 Mar 2024 02:40

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Contributors

Author: B. Charbonneau
Author: M.S. Block
Author: W.R. Bamlet
Author: R.A. Vierkant
Author: K.R. Kalli
Author: Z. Fogarty
Author: D.N. Rider
Author: T.A. Sellers
Author: S.S. Tworoger
Author: E. Poole
Author: H.A. Risch
Author: H.B. Salvesen
Author: L.A. Kiemeney
Author: L. Baglietto
Author: G.G. Giles
Author: G. Severi
Author: B. Trabert
Author: N. Wentzensen
Author: G. Chenevix-Trench
Author: A.S. Whittemore
Author: W. Sieh
Author: J. Chang-Claude
Author: E.V. Bandera
Author: I. Orlow
Author: K. Terry
Author: M.T. Goodman
Author: P.J. Thompson
Author: L.S. Cook
Author: M.A. Rossing
Author: R.B. Ness
Author: S.A. Narod
Author: J. Kupryjanczyk
Author: K. Lu
Author: R. Butzow
Author: T. Dork
Author: T. Pejovic
Author: I. Campbell
Author: N.D. Le
Author: C.H. Bunker
Author: N. Bogdanova
Author: I.B. Runnebaum
Author: D. Eccles ORCID iD
Author: J. Paul
Author: A.H. Wu
Author: S.A. Gayther
Author: E. Hogdall
Author: F. Heitz
Author: S.B. Kaye
Author: B.Y. Karlan
Author: H. Anton-Culver
Author: J. Gronwald
Author: C.K. Hogdall
Author: D. Lambrechts
Author: P.A. Fasching
Author: U. Menon
Author: J. Schildkraut
Author: C.L. Pearce
Author: D.A. Levine
Author: S.K. Kjaer
Author: D. Cramer
Author: J.M. Flanagan
Author: C.M. Phelan
Author: R. Brown
Author: L.F.A.G. Massuger
Author: H. Song
Author: J.A. Doherty
Author: C. Krakstad
Author: D. Liang
Author: K. Odunsi
Author: A. Berchuck
Author: A. Jensen
Author: J. Lubinski
Author: H. Nevanlinna
Author: Y.T. Bean
Author: G. Lurie
Author: A. Ziogas
Author: C. Walsh
Author: E. Despierre
Author: L. Brinton
Author: A. Hein
Author: A. Rudolph
Author: A. Dansonka-Mieszkowska
Author: S.H. Olson
Author: P. Harter
Author: J. Tyrer
Author: A.F. Vitonis
Author: A. Brooks-Wilson
Author: K.K. Aben
Author: M.C. Pike
Author: S.J. Ramus
Author: E. Wik
Author: C. Cybulski
Author: J. Lin
Author: L. Sucheston
Author: R. Edwards
Author: V. McGuire
Author: J. Lester
Author: A. du Bois
Author: L. Lundvall
Author: S. Wang-Gohrke
Author: L.M. Szafron
Author: S. Lambrechts
Author: H. Yang
Author: M.W. Beckmann
Author: L.M. Pelttari
Author: A.M. Van Altena
Author: D. van den Berg
Author: M.K. Halle
Author: A. Gentry-Maharaj
Author: I. Schwaab
Author: U. Chandran
Author: J. Menkiszak
Author: A.B. Ekici
Author: L.R. Wilkens
Author: A. Leminen
Author: F. Modugno
Author: G. Friel
Author: J.H. Rothstein
Author: I. Vergote
Author: M. Garcia-Closas
Author: M.A.T. Hildebrandt
Author: P. Sobiczewski
Author: L.E. Kelemen
Author: P.D.P. Pharoah
Author: K. Moysich
Author: K.L. Knutson
Author: J.M. Cunningham
Author: B.L. Fridley
Author: E.L. Goode

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