Data in support of 'Characterization of the watercress (Nasturtium officinale R. Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health
Data in support of 'Characterization of the watercress (Nasturtium officinale R. Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health
The watercress transcriptome was described in this manuscript for the first time through de novo RNASeq data assembly (Trinity), annotation, and differential expression analysis. These tables contain the data produced by the above analysis. Specifically: Supplement Table 1 compiles loci annotation and differential expression results, whereas Supplement Table 2 and 3 contain the raw expression data used in differential expression analysis for plant antioxidant capacity and glucosinolate content respectively.
For further information on the analysis and results, please see the publication:
Voutsina et al. (2016) Characterization of the watercress (Nasturtium officinale R Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health, BMC Genomics
http://dx.doi.org/10.1186/s12864-016-2704-4
http://eprints.soton.ac.uk/394514/
watercress, nasturtium officinale, brassicaceae, RNAseq, de novo assesmbly, differential expression, antioxidant capacity, glucosinolates, gluconasturtiin, phenylpropanoid
University of Southampton
Voutsina, Nikol
68a57328-0a4b-4f72-a17d-d3e77f7240f7
Chapman, Mark
8bac4a92-bfa7-4c3c-af29-9af852ef6383
Voutsina, Nikol
68a57328-0a4b-4f72-a17d-d3e77f7240f7
Chapman, Mark
8bac4a92-bfa7-4c3c-af29-9af852ef6383
Voutsina, Nikol, Chapman, Mark and Taylor, Gail
(2016)
Data in support of 'Characterization of the watercress (Nasturtium officinale R. Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health.
University of Southampton
doi:10.5258/SOTON/394656
[Dataset]
Abstract
The watercress transcriptome was described in this manuscript for the first time through de novo RNASeq data assembly (Trinity), annotation, and differential expression analysis. These tables contain the data produced by the above analysis. Specifically: Supplement Table 1 compiles loci annotation and differential expression results, whereas Supplement Table 2 and 3 contain the raw expression data used in differential expression analysis for plant antioxidant capacity and glucosinolate content respectively.
For further information on the analysis and results, please see the publication:
Voutsina et al. (2016) Characterization of the watercress (Nasturtium officinale R Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health, BMC Genomics
http://dx.doi.org/10.1186/s12864-016-2704-4
http://eprints.soton.ac.uk/394514/
Spreadsheet
Supplement_Table_1.xlsx
- Dataset
Spreadsheet
Supplement_Table_2.xlsx
- Dataset
Spreadsheet
Supplement_Table_3.xlsx
- Dataset
More information
Published date: 2016
Keywords:
watercress, nasturtium officinale, brassicaceae, RNAseq, de novo assesmbly, differential expression, antioxidant capacity, glucosinolates, gluconasturtiin, phenylpropanoid
Organisations:
Centre for Biological Sciences, Environmental
Identifiers
Local EPrints ID: 394656
URI: http://eprints.soton.ac.uk/id/eprint/394656
PURE UUID: 74167ea3-d893-4698-912f-7af676977c23
Catalogue record
Date deposited: 23 May 2016 16:30
Last modified: 05 Nov 2023 02:47
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Contributors
Creator:
Nikol Voutsina
Creator:
Gail Taylor
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