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Analysis of European case-control studies suggests that common inherited variation in mitochondrial DNA is not involved in susceptibility to amyotrophic lateral sclerosis

Analysis of European case-control studies suggests that common inherited variation in mitochondrial DNA is not involved in susceptibility to amyotrophic lateral sclerosis
Analysis of European case-control studies suggests that common inherited variation in mitochondrial DNA is not involved in susceptibility to amyotrophic lateral sclerosis
While some cases of familial ALS can be entirely attributed to known inherited variation, the majority (?90%) are sporadic, where the cause(s) are not entirely understood. Both genetic and environmental factors may contribute to susceptibility. Mitochondrial damage, a common feature of neurodegenerative disease, is observed in most patients and inherited polymorphism in the mitochondrial genome has been suggested as a contributing factor. We used an economic and efficient method to test whether such involvement is probable. We genotyped 22 mtDNA coding region SNPs and sequenced the mtDNA hypervariable region 1 to determine the position of each mitochondrial genome within the genealogy of mitochondrial haplotypes in samples of ALS patients (n =?700) and controls (n =?462) from two European populations. We compared haplotype and haplogroup distribution in cases and controls drawn from the same populations. No statistical difference was observed between cases and controls at either the haplogroup or haplotype level (p = ??0.2). In conclusion, it is unlikely that common, shared genetic variants in the mitochondrial genome contribute substantially to ALS. Combining the data with other studies will allow meta-analysis to look for variants with modest effect sizes. The sequencing of complete mitochondrial genomes will be required to assess the role of rare mutations.
1748-2968
341-346
Ingram, Catherine J.E.
da46b4f0-b7f0-48bd-998f-b7eba8416d43
Weale, Michael E.
08e9259c-f52a-4279-925a-dfcecb60ad34
Plaster, Christopher A.
1eb149df-efe0-4faa-bf29-749be5374af3
Morrison, Karen E.
f00890f0-2fde-4dbd-a73b-7422e1b0ede8
Goodall, Emily F.
b1af5241-f788-44b5-966c-510db4ca24ef
Pall, Hardev S.
270999ad-5e88-4485-b48b-d9b60858cfb1
Beck, Marcus
b452a32c-2547-4423-aabb-22aee2a9a0ce
Jablonka, Sibylle
4ea31301-35fd-400e-a942-70157d4af172
Sendtner, Michael
00f80b6a-c6a3-4191-8f66-6343fce3811d
Fisher, Elizabeth M.C.
297244d9-0d75-4e0e-a8cf-318e0bd1defd
Bradman, Neil
456cd7f6-cfc4-436e-8cbb-9c7359845e99
Kasperavičiūtė, Dalia
721e3e59-2fb1-4324-9bf2-42209169d9b9
Ingram, Catherine J.E.
da46b4f0-b7f0-48bd-998f-b7eba8416d43
Weale, Michael E.
08e9259c-f52a-4279-925a-dfcecb60ad34
Plaster, Christopher A.
1eb149df-efe0-4faa-bf29-749be5374af3
Morrison, Karen E.
f00890f0-2fde-4dbd-a73b-7422e1b0ede8
Goodall, Emily F.
b1af5241-f788-44b5-966c-510db4ca24ef
Pall, Hardev S.
270999ad-5e88-4485-b48b-d9b60858cfb1
Beck, Marcus
b452a32c-2547-4423-aabb-22aee2a9a0ce
Jablonka, Sibylle
4ea31301-35fd-400e-a942-70157d4af172
Sendtner, Michael
00f80b6a-c6a3-4191-8f66-6343fce3811d
Fisher, Elizabeth M.C.
297244d9-0d75-4e0e-a8cf-318e0bd1defd
Bradman, Neil
456cd7f6-cfc4-436e-8cbb-9c7359845e99
Kasperavičiūtė, Dalia
721e3e59-2fb1-4324-9bf2-42209169d9b9

Ingram, Catherine J.E., Weale, Michael E., Plaster, Christopher A., Morrison, Karen E., Goodall, Emily F., Pall, Hardev S., Beck, Marcus, Jablonka, Sibylle, Sendtner, Michael, Fisher, Elizabeth M.C., Bradman, Neil and Kasperavičiūtė, Dalia (2012) Analysis of European case-control studies suggests that common inherited variation in mitochondrial DNA is not involved in susceptibility to amyotrophic lateral sclerosis. Amyotrophic Lateral Sclerosis, 13 (4), 341-346. (doi:10.3109/17482968.2012.654394).

Record type: Article

Abstract

While some cases of familial ALS can be entirely attributed to known inherited variation, the majority (?90%) are sporadic, where the cause(s) are not entirely understood. Both genetic and environmental factors may contribute to susceptibility. Mitochondrial damage, a common feature of neurodegenerative disease, is observed in most patients and inherited polymorphism in the mitochondrial genome has been suggested as a contributing factor. We used an economic and efficient method to test whether such involvement is probable. We genotyped 22 mtDNA coding region SNPs and sequenced the mtDNA hypervariable region 1 to determine the position of each mitochondrial genome within the genealogy of mitochondrial haplotypes in samples of ALS patients (n =?700) and controls (n =?462) from two European populations. We compared haplotype and haplogroup distribution in cases and controls drawn from the same populations. No statistical difference was observed between cases and controls at either the haplogroup or haplotype level (p = ??0.2). In conclusion, it is unlikely that common, shared genetic variants in the mitochondrial genome contribute substantially to ALS. Combining the data with other studies will allow meta-analysis to look for variants with modest effect sizes. The sequencing of complete mitochondrial genomes will be required to assess the role of rare mutations.

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More information

Accepted/In Press date: 29 December 2011
e-pub ahead of print date: 13 March 2012
Organisations: Medical Education

Identifiers

Local EPrints ID: 398567
URI: http://eprints.soton.ac.uk/id/eprint/398567
ISSN: 1748-2968
PURE UUID: 5a0701f4-d8c3-436f-8017-92148190a394
ORCID for Karen E. Morrison: ORCID iD orcid.org/0000-0003-0216-5717

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Date deposited: 26 Jul 2016 13:10
Last modified: 15 Mar 2024 01:36

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Contributors

Author: Catherine J.E. Ingram
Author: Michael E. Weale
Author: Christopher A. Plaster
Author: Karen E. Morrison ORCID iD
Author: Emily F. Goodall
Author: Hardev S. Pall
Author: Marcus Beck
Author: Sibylle Jablonka
Author: Michael Sendtner
Author: Elizabeth M.C. Fisher
Author: Neil Bradman
Author: Dalia Kasperavičiūtė

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