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Interphase molecular cytogenetic screening for chromosomal abnormalities of prognostic significance in childhood acute lymphoblastic leukaemia: a UK Cancer Cytogenetics Group Study

Interphase molecular cytogenetic screening for chromosomal abnormalities of prognostic significance in childhood acute lymphoblastic leukaemia: a UK Cancer Cytogenetics Group Study
Interphase molecular cytogenetic screening for chromosomal abnormalities of prognostic significance in childhood acute lymphoblastic leukaemia: a UK Cancer Cytogenetics Group Study
Interphase fluorescence in situ hybridization (iFISH) was used independently to reveal chromosomal abnormalities of prognostic importance in a large, consecutive series of children (n = 2367) with acute lymphoblastic leukaemia (ALL). The fusions, TEL/AML1 and BCR/ABL, and rearrangements of the MLL gene occurred at frequencies of 22% (n = 447/2027) (25% in B-lineage ALL), 2% (n = 43/2027) and 2% (n = 47/2016) respectively. There was considerable variation in iFISH signal patterns both between and within patient samples. The TEL/AML1 probe showed the highest incidence of variation (59%, n = 524/884), which included 38 (2%) patients with clustered, multiple copies of AML1. We were thus able to define amplification of AML1 as a new recurrent abnormality in ALL, associated with a poor prognosis. Amplification involving the ABL gene, a rare recurrent abnormality confined to T ALL patients, was identified for the first time. The use of centromeric probes revealed significant hidden high hyperdiploidy of 33% and 59%, respectively, in patients with normal (n = 21/64) or failed (n = 32/54) cytogenetic results. The iFISH contributed significantly to the high success rate of 91% (n = 2114/2323) and the remarkable abnormality detection rate of 89% (n = 1879/2114). This study highlights the importance of iFISH as a complementary tool to cytogenetics in routine screening for significant chromosomal abnormalities in ALL.
fluorescence in situ hybridization, childhood acute lymphoblastic leukaemia, chromosomal abnormalities, prognosis
0007-1048
520-530
Harrison, Christine J.
52da7673-509c-4b88-b92e-0c021c9c7d3e
Moorman, Anthony V.
e4ced178-ee03-47ef-bc5e-25d8453951d5
Barber, Kerry E.
68bc6851-3dd1-4767-ad97-8de1918224db
Broadfield, Zoë J.
525b4648-7c88-488a-aefa-0018ac485eb4
Cheung, Kan L.
c3e2bd17-d17f-4809-9c10-7e9dd19abc1d
Harris, Rachel
d3d72303-9c2e-484c-9857-ffac25452c98
Jalali, G. Reza
115b1825-78a7-489b-b4fe-dc846a3df33c
Robinson, Hazel M.
c406aa02-ca17-4ba1-9aa4-24bab6415fc0
Strefford, Jonathan C.
3782b392-f080-42bf-bdca-8aa5d6ca532f
Stewart, Adam
f892bf1d-c923-405d-a33b-cc2935b3fc20
Wright, Sarah
775184e7-df20-4253-86c9-90d25e2b104c
Griffiths, Mike
f147af96-79ab-43ef-984c-550407b82c39
Ross, Fiona M.
ec0958f8-b992-4e4a-b7e3-c474600390ba
Harewood, Louise
79d54ed0-3ed3-48e0-9b58-8197f117fb45
Martineau, Mary
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Harrison, Christine J.
52da7673-509c-4b88-b92e-0c021c9c7d3e
Moorman, Anthony V.
e4ced178-ee03-47ef-bc5e-25d8453951d5
Barber, Kerry E.
68bc6851-3dd1-4767-ad97-8de1918224db
Broadfield, Zoë J.
525b4648-7c88-488a-aefa-0018ac485eb4
Cheung, Kan L.
c3e2bd17-d17f-4809-9c10-7e9dd19abc1d
Harris, Rachel
d3d72303-9c2e-484c-9857-ffac25452c98
Jalali, G. Reza
115b1825-78a7-489b-b4fe-dc846a3df33c
Robinson, Hazel M.
c406aa02-ca17-4ba1-9aa4-24bab6415fc0
Strefford, Jonathan C.
3782b392-f080-42bf-bdca-8aa5d6ca532f
Stewart, Adam
f892bf1d-c923-405d-a33b-cc2935b3fc20
Wright, Sarah
775184e7-df20-4253-86c9-90d25e2b104c
Griffiths, Mike
f147af96-79ab-43ef-984c-550407b82c39
Ross, Fiona M.
ec0958f8-b992-4e4a-b7e3-c474600390ba
Harewood, Louise
79d54ed0-3ed3-48e0-9b58-8197f117fb45
Martineau, Mary
6cc6f57f-7b57-4583-81eb-17dac737e35c

Harrison, Christine J., Moorman, Anthony V., Barber, Kerry E., Broadfield, Zoë J., Cheung, Kan L., Harris, Rachel, Jalali, G. Reza, Robinson, Hazel M., Strefford, Jonathan C., Stewart, Adam, Wright, Sarah, Griffiths, Mike, Ross, Fiona M., Harewood, Louise and Martineau, Mary (2005) Interphase molecular cytogenetic screening for chromosomal abnormalities of prognostic significance in childhood acute lymphoblastic leukaemia: a UK Cancer Cytogenetics Group Study. British Journal of Haematology, 129 (4), 520-530. (doi:10.1111/j.1365-2141.2005.05497.x).

Record type: Article

Abstract

Interphase fluorescence in situ hybridization (iFISH) was used independently to reveal chromosomal abnormalities of prognostic importance in a large, consecutive series of children (n = 2367) with acute lymphoblastic leukaemia (ALL). The fusions, TEL/AML1 and BCR/ABL, and rearrangements of the MLL gene occurred at frequencies of 22% (n = 447/2027) (25% in B-lineage ALL), 2% (n = 43/2027) and 2% (n = 47/2016) respectively. There was considerable variation in iFISH signal patterns both between and within patient samples. The TEL/AML1 probe showed the highest incidence of variation (59%, n = 524/884), which included 38 (2%) patients with clustered, multiple copies of AML1. We were thus able to define amplification of AML1 as a new recurrent abnormality in ALL, associated with a poor prognosis. Amplification involving the ABL gene, a rare recurrent abnormality confined to T ALL patients, was identified for the first time. The use of centromeric probes revealed significant hidden high hyperdiploidy of 33% and 59%, respectively, in patients with normal (n = 21/64) or failed (n = 32/54) cytogenetic results. The iFISH contributed significantly to the high success rate of 91% (n = 2114/2323) and the remarkable abnormality detection rate of 89% (n = 1879/2114). This study highlights the importance of iFISH as a complementary tool to cytogenetics in routine screening for significant chromosomal abnormalities in ALL.

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Published date: 2005
Keywords: fluorescence in situ hybridization, childhood acute lymphoblastic leukaemia, chromosomal abnormalities, prognosis

Identifiers

Local EPrints ID: 24740
URI: http://eprints.soton.ac.uk/id/eprint/24740
ISSN: 0007-1048
PURE UUID: d5ce221d-167f-4b47-baca-22ba8df30cff
ORCID for Jonathan C. Strefford: ORCID iD orcid.org/0000-0002-0972-2881

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Date deposited: 03 Apr 2006
Last modified: 16 Mar 2024 03:40

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Contributors

Author: Christine J. Harrison
Author: Anthony V. Moorman
Author: Kerry E. Barber
Author: Zoë J. Broadfield
Author: Kan L. Cheung
Author: Rachel Harris
Author: G. Reza Jalali
Author: Hazel M. Robinson
Author: Adam Stewart
Author: Sarah Wright
Author: Mike Griffiths
Author: Fiona M. Ross
Author: Louise Harewood
Author: Mary Martineau

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