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A novel gene, NSD1, is fused to NUP98 in the t(5;11)(q35;p15.5) in de novo childhood acute myeloid leukemia

A novel gene, NSD1, is fused to NUP98 in the t(5;11)(q35;p15.5) in de novo childhood acute myeloid leukemia
A novel gene, NSD1, is fused to NUP98 in the t(5;11)(q35;p15.5) in de novo childhood acute myeloid leukemia
The recurrent translocation t(5;11)(q35;p15.5) associated with a 5q deletion, del(5q), has been reported in childhood acute myeloid leukemia (AML). We report the cloning of the translocation breakpoints in de novo childhood AML harboring a cryptic t(5;11)(q35;p15.5). Fluorescence in situ hybridization (FISH) analysis demonstrated that the nucleoporin gene (NUP98) at 11p15.5 was disrupted by this translocation. By using 3'-rapid amplification of complementary DNA ends (3'-RACE) polymerase chain reaction, we identified a chimeric messenger RNA that results in the in-frame fusion of NUP98 to a novel gene, NSD1. The NSD1 gene has 2596 amino acid residues and a 85% homology to the murine Nsd1 with the domain structure being conserved. The NSD1 gene was localized to 5q35 by FISH and is widely expressed. The reciprocal transcript, NSD1-NUP98, was also detected by reverse transcriptase-polymerase chain reaction. This is the first report in which the novel gene NSD1 has been implicated in human malignancy.
leukemia, pair 5, dna, genetic, humans, rna, human, nuclear pore complex proteins, myeloid, research support, protein, etiology, proteins, childhood, fluorescence, translocation, cytogenetic analysis, peptides, molecular sequence data, pair 11, intracellular signaling peptides and proteins, membrane proteins, base sequence, carrier proteins, reverse transcriptase polymerase chain reaction, report, blood, nuclear proteins, chromosomes, polymerase chain reaction, laboratories, non-us government, analysis, genetics, acid, acute disease, child, in situ hybridization
0006-4971
1264-1267
Jaju, Rina J.
198bc749-3ee3-4361-a68f-71d8bde7711d
Fidler, Carrie
37206890-51bc-42f8-8afc-d1b6abdcedcc
Haas, Oskar A.
01b2ed84-ada7-4400-b34f-cb22a32b8c25
Strickson, Amanda J.
5ab2b2f4-29fa-4d7c-8afc-3cc98f81d618
Watkins, Fiona
a30c90ed-7766-4d49-8ae5-11074aa47871
Clark, Kevin
44500e8c-788c-4bdc-8205-ce74b816e3f6
Cross, Nicholas C.P.
f87650da-b908-4a34-b31b-d62c5f186fe4
Cheng, Jan-Fang
1f7d8aee-1586-4bbe-9adf-f8aaf75894ce
Aplan, Peter D.
90aca1d6-ff81-4cf3-b196-ac8763c99a2c
Kearney, Lyndal
ad57b9c8-b5e2-4a77-9a11-8d1e3827e298
Boultwood, Jacqueline
653d33fa-0c0a-4a8a-b119-57a6e466b334
Wainscoat, James S.
d7ab3d21-ec29-4315-b32e-08e6fdeb35d3
Jaju, Rina J.
198bc749-3ee3-4361-a68f-71d8bde7711d
Fidler, Carrie
37206890-51bc-42f8-8afc-d1b6abdcedcc
Haas, Oskar A.
01b2ed84-ada7-4400-b34f-cb22a32b8c25
Strickson, Amanda J.
5ab2b2f4-29fa-4d7c-8afc-3cc98f81d618
Watkins, Fiona
a30c90ed-7766-4d49-8ae5-11074aa47871
Clark, Kevin
44500e8c-788c-4bdc-8205-ce74b816e3f6
Cross, Nicholas C.P.
f87650da-b908-4a34-b31b-d62c5f186fe4
Cheng, Jan-Fang
1f7d8aee-1586-4bbe-9adf-f8aaf75894ce
Aplan, Peter D.
90aca1d6-ff81-4cf3-b196-ac8763c99a2c
Kearney, Lyndal
ad57b9c8-b5e2-4a77-9a11-8d1e3827e298
Boultwood, Jacqueline
653d33fa-0c0a-4a8a-b119-57a6e466b334
Wainscoat, James S.
d7ab3d21-ec29-4315-b32e-08e6fdeb35d3

Jaju, Rina J., Fidler, Carrie, Haas, Oskar A., Strickson, Amanda J., Watkins, Fiona, Clark, Kevin, Cross, Nicholas C.P., Cheng, Jan-Fang, Aplan, Peter D., Kearney, Lyndal, Boultwood, Jacqueline and Wainscoat, James S. (2001) A novel gene, NSD1, is fused to NUP98 in the t(5;11)(q35;p15.5) in de novo childhood acute myeloid leukemia. Blood, 98 (4), 1264-1267. (doi:10.1182/blood.V98.4.1264).

Record type: Article

Abstract

The recurrent translocation t(5;11)(q35;p15.5) associated with a 5q deletion, del(5q), has been reported in childhood acute myeloid leukemia (AML). We report the cloning of the translocation breakpoints in de novo childhood AML harboring a cryptic t(5;11)(q35;p15.5). Fluorescence in situ hybridization (FISH) analysis demonstrated that the nucleoporin gene (NUP98) at 11p15.5 was disrupted by this translocation. By using 3'-rapid amplification of complementary DNA ends (3'-RACE) polymerase chain reaction, we identified a chimeric messenger RNA that results in the in-frame fusion of NUP98 to a novel gene, NSD1. The NSD1 gene has 2596 amino acid residues and a 85% homology to the murine Nsd1 with the domain structure being conserved. The NSD1 gene was localized to 5q35 by FISH and is widely expressed. The reciprocal transcript, NSD1-NUP98, was also detected by reverse transcriptase-polymerase chain reaction. This is the first report in which the novel gene NSD1 has been implicated in human malignancy.

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More information

Published date: 15 August 2001
Keywords: leukemia, pair 5, dna, genetic, humans, rna, human, nuclear pore complex proteins, myeloid, research support, protein, etiology, proteins, childhood, fluorescence, translocation, cytogenetic analysis, peptides, molecular sequence data, pair 11, intracellular signaling peptides and proteins, membrane proteins, base sequence, carrier proteins, reverse transcriptase polymerase chain reaction, report, blood, nuclear proteins, chromosomes, polymerase chain reaction, laboratories, non-us government, analysis, genetics, acid, acute disease, child, in situ hybridization

Identifiers

Local EPrints ID: 24777
URI: http://eprints.soton.ac.uk/id/eprint/24777
ISSN: 0006-4971
PURE UUID: 0c3ecddb-5a40-45e7-af90-4fc6abb10675
ORCID for Nicholas C.P. Cross: ORCID iD orcid.org/0000-0001-5481-2555

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Date deposited: 05 Apr 2006
Last modified: 16 Mar 2024 03:23

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Contributors

Author: Rina J. Jaju
Author: Carrie Fidler
Author: Oskar A. Haas
Author: Amanda J. Strickson
Author: Fiona Watkins
Author: Kevin Clark
Author: Jan-Fang Cheng
Author: Peter D. Aplan
Author: Lyndal Kearney
Author: Jacqueline Boultwood
Author: James S. Wainscoat

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