Provenance of e-Science Experiments - experience from Bioinformatics
Provenance of e-Science Experiments - experience from Bioinformatics
Like experiments performed at a laboratory bench, the data associated with an e-Science experiment are of reduced value if other scientists are not able to identify the origin, or provenance, of those data. Provenance information is essential if experiments are to be validated and verified by others, or even by those who originally performed them. In this article, we give an overview of our initial work on the provenance of bioinformatics e-Science experiments within myGrid. We use two kinds of provenance: the derivation path of information and annotation. We show how this kind of provenance can be delivered within the myGrid demonstrator WorkBench and we explore how the resulting Webs of experimental data holdings can be mined for useful information and presentations for the e-Scientist.
1904425119
223-226
Greenwood, Mark
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Goble, Carole
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Stevens, Robert
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Zhao, Jun
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Addis, Matthew
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Marvin, Darren
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Moreau, Luc
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Oinn, Tom
dca5d754-c170-4716-ace5-5a6e9f3822cd
2003
Greenwood, Mark
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Goble, Carole
8c248c0f-f19e-4dda-838b-77a89c5d3d38
Stevens, Robert
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Zhao, Jun
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Addis, Matthew
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Marvin, Darren
6446558a-f94f-4588-8792-858369321564
Moreau, Luc
033c63dd-3fe9-4040-849f-dfccbe0406f8
Oinn, Tom
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Greenwood, Mark, Goble, Carole, Stevens, Robert, Zhao, Jun, Addis, Matthew, Marvin, Darren, Moreau, Luc and Oinn, Tom
(2003)
Provenance of e-Science Experiments - experience from Bioinformatics.
The UK OST e-Science second All Hands Meeting 2003 (AHM'03), Nottingham, United Kingdom.
.
Record type:
Conference or Workshop Item
(Paper)
Abstract
Like experiments performed at a laboratory bench, the data associated with an e-Science experiment are of reduced value if other scientists are not able to identify the origin, or provenance, of those data. Provenance information is essential if experiments are to be validated and verified by others, or even by those who originally performed them. In this article, we give an overview of our initial work on the provenance of bioinformatics e-Science experiments within myGrid. We use two kinds of provenance: the derivation path of information and annotation. We show how this kind of provenance can be delivered within the myGrid demonstrator WorkBench and we explore how the resulting Webs of experimental data holdings can be mined for useful information and presentations for the e-Scientist.
Text
prov-all-hands.pdf
- Accepted Manuscript
Text
prov-ahm03.pdf
- Accepted Manuscript
More information
Published date: 2003
Additional Information:
Event Dates: 2-4 September 2003
Venue - Dates:
The UK OST e-Science second All Hands Meeting 2003 (AHM'03), Nottingham, United Kingdom, 2003-09-01
Organisations:
Web & Internet Science, Electronics & Computer Science, IT Innovation
Identifiers
Local EPrints ID: 258895
URI: http://eprints.soton.ac.uk/id/eprint/258895
ISBN: 1904425119
PURE UUID: 7ac169b7-a593-4a80-b4f7-b636d5264400
Catalogue record
Date deposited: 08 Mar 2004
Last modified: 14 Mar 2024 06:14
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Contributors
Author:
Mark Greenwood
Author:
Carole Goble
Author:
Robert Stevens
Author:
Jun Zhao
Author:
Matthew Addis
Author:
Darren Marvin
Author:
Luc Moreau
Author:
Tom Oinn
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