Developmental motifs reveal complex structure in cell lineages


Geard, Nicholas, Bullock, Seth, Lohaus, Rolf, Azevedo, Ricardo B.R. and Wiles, Janet (2010) Developmental motifs reveal complex structure in cell lineages Complexity, 16, (4), pp. 48-57. (doi:10.1002/cplx.20341).

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Description/Abstract

Many natural and technological systems are complex, with organisational structures that exhibit characteristic patterns, but defy concise description. One effective approach to analysing such systems is in terms of repeated topological motifs. Here, we extend the motif concept to characterise the dynamic behaviour of complex systems by introducing developmental motifs, which capture patterns of system growth. As a proof of concept, we use developmental motifs to analyse the developmental cell lineage of the nematode Caenorhabditis elegans, revealing a new perspective on its complex structure. We use a family of computational models to explore how biases arising from the dynamics of the developmental gene network, as well as spatial and temporal constraints acting on development, contribute to this complex organisation.

Item Type: Article
Digital Object Identifier (DOI): doi:10.1002/cplx.20341
Keywords: cell lineages, development, gene regulatory networks, generative bias, motifs
Subjects:
Organisations: Agents, Interactions & Complexity
ePrint ID: 271194
Date :
Date Event
17 August 2010e-pub ahead of print
March 2011Published
Date Deposited: 27 May 2010 17:34
Last Modified: 17 Apr 2017 18:20
Further Information:Google Scholar
URI: http://eprints.soton.ac.uk/id/eprint/271194

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