Polynomially scaling spin dynamics simulation algorithm based on adaptive state-space restriction
Polynomially scaling spin dynamics simulation algorithm based on adaptive state-space restriction
We report progress with an old problem in magnetic resonance—that of the exponential scaling of simulation complexity with the number of spins. It is demonstrated below that a polynomially scaling algorithm can be obtained (and accurate simulations performed for over 200 coupled spins) if the dimension of the Liouville state space is reduced by excluding unimportant and unpopulated spin states. We found the class of such states to be surprisingly wide. It actually appears that a majority of states in large spin systems are not essential in magnetic resonance simulations and can safely be dropped from the state space. In restricted state spaces the spin dynamics simulations scale polynomially. In cases of favourable interaction topologies (sparse graphs, e.g. in protein NMR) the asymptotic scaling is linear, opening the way to direct fitting of molecular structures to experimental spectra.
nmr, epr, spin, simulation, polynomial scaling
241-250
Kuprov, Ilya
bb07f28a-5038-4524-8146-e3fc8344c065
Wagner-Rundell, Nicola
4a2854f6-aea7-4b5f-a82f-d188339fc43e
Hore, P.J.
cad4561e-9571-4b49-b633-1c0bb470d144
December 2007
Kuprov, Ilya
bb07f28a-5038-4524-8146-e3fc8344c065
Wagner-Rundell, Nicola
4a2854f6-aea7-4b5f-a82f-d188339fc43e
Hore, P.J.
cad4561e-9571-4b49-b633-1c0bb470d144
Kuprov, Ilya, Wagner-Rundell, Nicola and Hore, P.J.
(2007)
Polynomially scaling spin dynamics simulation algorithm based on adaptive state-space restriction.
Journal of Magnetic Resonance, 189 (2), .
(doi:10.1016/j.jmr.2007.09.014).
Abstract
We report progress with an old problem in magnetic resonance—that of the exponential scaling of simulation complexity with the number of spins. It is demonstrated below that a polynomially scaling algorithm can be obtained (and accurate simulations performed for over 200 coupled spins) if the dimension of the Liouville state space is reduced by excluding unimportant and unpopulated spin states. We found the class of such states to be surprisingly wide. It actually appears that a majority of states in large spin systems are not essential in magnetic resonance simulations and can safely be dropped from the state space. In restricted state spaces the spin dynamics simulations scale polynomially. In cases of favourable interaction topologies (sparse graphs, e.g. in protein NMR) the asymptotic scaling is linear, opening the way to direct fitting of molecular structures to experimental spectra.
This record has no associated files available for download.
More information
Published date: December 2007
Keywords:
nmr, epr, spin, simulation, polynomial scaling
Organisations:
Computational Systems Chemistry
Identifiers
Local EPrints ID: 347385
URI: http://eprints.soton.ac.uk/id/eprint/347385
PURE UUID: ce2c3604-c75a-4141-8ec2-8aba1c81e2b5
Catalogue record
Date deposited: 27 Feb 2013 11:53
Last modified: 15 Mar 2024 03:43
Export record
Altmetrics
Contributors
Author:
Nicola Wagner-Rundell
Author:
P.J. Hore
Download statistics
Downloads from ePrints over the past year. Other digital versions may also be available to download e.g. from the publisher's website.
View more statistics