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J. Chem. Phys. 139, 054107 (2013); http://dx.doi.org/10.1063/1.4817001 (8 pages)
A variational method for density functional theory calculations on metallic systems with thousands of atoms
(Received 8 May 2013; accepted 16 July 2013; published online 2 August 2013)
© 2013 AIP Publishing LLC
Article Outline
- INTRODUCTION
- FINITE-TEMPERATURE KS-DFT
- IMPLEMENTATION IN ONETEP
- DIRECT FREE ENERGY MINIMIZATION
- Inner loop
- Outer loop
- RESULTS AND DISCUSSION
- Scaling with the system size
- Validation tests
- CONCLUSIONS
KEYWORDS, PACS, and IPC
Keywords
copper, density functional theory, electronic density of states, free energy, gold, nanoparticles, variational techniques
PACS
-
Electronic structure of nanoscale materials and related systems
-
Other thermodynamical quantities
-
Thermal properties of small particles, nanocrystals, nanotubes, and other related systems
-
Basis sets (LCAO, plane-wave, APW, etc.) and related methodology (scattering methods, ASA, linearized methods, etc.)
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Density functional theory, local density approximation, gradient and other corrections
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Transition metals and alloys
International Patent Classification (IPC)
Nano-structures
ARTICLE DATA
- P. Hohenberg and W. Kohn, Phys. Rev. 136, B864 (1964).
- W. Kohn and L. J. Sham, Phys. Rev. 140, A1133 (1965).
- M. C. Payne, M. P. Teter, D. C. Allan, T. A. Arias, and J. D. Joannopoulos, Rev. Mod. Phys. 64, 1045 (1992).
- S. J. Clark, M. D. Segall, C. J. Pickard, P. J. Hasnip, M. J. Probert, K. Refson, and M. C. Payne, Z. Kristallogr. Kristallgeom. Kristallphys. 220, 567 (2005).
- G. Kresse and J. Furthmüller, Phys. Rev. B 54, 11169 (1996).
- P. Giannozzi, S. Baroni, N. Bonini, M. Calandra, R. Car, C. Cavazzoni, D. Ceresoli, G. L. Chiarotti, M. Cococcioni, I. Dabo, A. dal Corso, S. de Gironcoli, S. Fabris, G. Fratesi, R. Gebauer, U. Gerstmann, C. Gougoussis, A. Kokalj, M. Lazzeri, L. Martin-Samos, N. Marzari, F. Mauri, R. Mazzarello, S. Paolini, A. Pasquarello, L. Paulatto, C. Sbraccia, S. Scandolo, G. Sclauzero, A. P. Seitsonen, A. Smogunov, P. Umari, and R. M. Wentzcovitch, J. Phys. Condens. Matter 21, 395502 (2009).
- X. Gonze, B. Amadon, P. M. Anglade, J. M. Beuken, F. Bottin, P. Boulanger, F. Bruneval, D. Caliste, R. Caracas, M. Cote, T. Deutsch, L. Genovese, P. Ghosez, M. Giantomassi, S. Goedecker, D. R. Hamann, P. Hermet, F. Jollet, G. Jomard, S. Leroux, M. Mancini, S. Mazevet, M. J. T. Oliveira, G. Onida, Y. Pouillon, T. Rangel, G. M. Rignanese, D. Sangalli, R. Shaltaf, M. Torrent, M. J. Verstraete, G. Zerah, and J. W. Zwanziger, Comput. Phys. Commun. 180, 2582 (2009).
- J. Enkovaara, C. Rostgaard, J. J. Mortensen, J. Chen, M. Duak, L. Ferrighi, J. Gavnholt, C. Glinsvad, V. Haikola, H. A. Hansen, H. H. Kristoffersen, M. Kuisma, A. H. Larsen, L. Lehtovaara, M. Ljungberg, O. Lopez-Acevedo, P. G. Moses, J. Ojanen, T. Olsen, V. Petzold, N. A. Romero, J. Stausholm-Møller, M. Strange, G. A. Tritsaris, M. Vanin, M. Walter, B. Hammer, H. Häkkinen, G. K. H. Madsen, R. M. Nieminen, J. K. Nørskov, M. Puska, T. T. Rantala, J. Schiøtz, K. S. Thygesen, and K. W. Jacobsen, J. Phys. Condens. Matter 22, 253202 (2010).
- P. E. Blöchl, Phys. Rev. B 50, 17953 (1994).
- E. R. Davidson and D. Feller, Chem. Rev. 86, 681 (1986). [ISI] [CAS]
- P. R. Briddon and R. Jones, Phys. Status Solidi B 217, 131 (2000).
- M. Valiev, E. J. Bylaska, N. Govind, K. Kowalski, T. P. Straatsma, H. J. J. van Dam, D. Wang, J. Nieplocha, E. Apra, T. L. Windus, and W. A. de Jong, Comput. Phys. Commun. 181, 1477 (2010).
- G. te Velde, F. M. Bickelhaupt, E. J. Baerends, C. Fonseca Guerra, S. J. A. van Gisbergen, J. G. Snijders, and T. Ziegler, J. Comput. Chem. 22, 931 (2001).
- O. F. Sankey and D. J. Niklewski, Phys. Rev. B 40, 3979 (1989). [MEDLINE]
- E. Artacho, D. Sánchez-Portal, P. Ordejón, A. García, and J. M. Soler, Phys. Status Solidi B 215, 809 (1999).
- S. García-Gil, A. García, N. Lorente, and P. Ordejón, Phys. Rev. B 79, 075441 (2009).
- A. S. Torralba, M. Todorovic, V. Brazdova, R. Choudhury, T. Miyazaki, M. J. Gillan, and D. R. Bowler, J. Phys. Condens. Matter 20, 294206 (2008).
- M. Chen, G. C. Guo, and L. He, J. Phys. Condens. Matter 22, 445501 (2010).
- M. J. Louwerse and G. Rothenberg, Phys. Rev. B 85, 035108 (2012).
- V. Blum, R. Gehrke, F. Hanke, P. Havu, V. Havu, X. Ren, K. Reuter, and M. Scheffler, Comput. Phys. Commun. 180, 2175 (2009).
- S. Goedecker, Rev. Mod. Phys. 71, 1085 (1999).
- E. Prodan and W. Kohn, Proc. Natl. Acad. Sci. U.S.A. 102, 11635 (2005). [MEDLINE]
- W. Kohn, Phys. Rev. Lett. 76, 3168 (1996). [MEDLINE]
- C.-K. Skylaris, P. D. Haynes, A. A. Mostofi, and M. C. Payne, J. Chem. Phys. 122, 084119 (2005)JCPSA6000122000008084119000001. [ISI]
- M. J. Gillan, D. R. Bowler, A. S. Torralba, and T. Miyazaki, Comput. Phys. Commun. 177, 14 (2007).
- J. Soler, E. Artacho, J. Gale, A. Garcia, J. Junquera, P. Ordejon, and D. Sanchez-Portal, J. Phys. Condens. Matter 14, 2745 (2002).
- T. Ozaki and H. Kino, Phys. Rev. B 72, 045121 (2005).
- L. Genovese, A. Neelov, S. Goedecker, T. Deutsch, S. A. Ghasemi, A. Willand, D. Caliste, O. Zilberberg, M. Rayson, A. Bergman, and R. Schneider, J. Chem. Phys. 129, 014109 (2008)JCPSA6000129000001014109000001. [MEDLINE]
- J. Kleis, J. Greeley, N. A. Romero, V. A. Morozov, H. Falsig, A. H. Larsen, J. Lu, J. J. Mortensen, M. Duak, K. S. Thygesen, J. K. Nørskov, and K. W. Jacobsen, Catal. Lett. 141, 1067 (2011).
- L. Li, A. H. Larsen, N. A. Romero, V. A. Morozov, C. Glinsvad, F. Abild-Pedersen, J. Greeley, K. W. Jacobsen, and J. K. Nørskov, J. Phys. Chem. Lett. 4, 222 (2013).
- F. Baletto and R. Ferrando, Rev. Mod. Phys. 77, 371 (2005).
- B. G. Walker, N. Marzari, and C. Molteni, J. Phys. Condens. Matter 18, L269 (2006).
- R. Kavanagh, X. M. Cao, W. F. Lin, C. Hardacre, and P. Hu, Angew. Chem., Int. Ed. 51, 1572 (2012).
- Z. P. Liu and P. Hu, J. Am. Chem. Soc. 125, 1958 (2003). [ISI] [MEDLINE]
- R. Ferrando, J. Jellinek, and R. L. Johnston, Chem. Rev. 108, 845 (2008).
- J. Oviedo and R. E. Palmer, J. Chem. Phys. 117, 9548 (2002)JCPSA6000117000021009548000001.
- J. Hafner, J. Comput. Chem. 29, 2044 (2008). [MEDLINE]
- N. D. Mermin, Phys. Rev. 137, A1441 (1965).
- R. G. Parr and W. Yang, Density-Functional Theory of Atoms and Molecules, International Series of Monographs on Chemistry Vol. 16 (Oxford University Press, 1989).
- P. Pulay, Chem. Phys. Lett. 73, 393 (1980).
- E. Cances, K. N. Kudin, G. E. Scuseria, and G. Turinici, J. Chem. Phys. 118, 5364 (2003)JCPSA6000118000012005364000001.
- M. J. Gillan, J. Phys. Condens. Matter 1, 689 (1989). [Inspec] [ISI] [CAS]
- M. P. Grumbach, D. Hohl, R. M. Martin, and R. Car, J. Phys. Condens. Matter 6, 1999 (1994). [Inspec] [ISI] [CAS]
- N. Marzari, D. Vanderbilt, and M. C. Payne, Phys. Rev. Lett. 79, 1337 (1997).
- C. Freysoldt, S. Boeck, and J. Neugebauer, Phys. Rev. B 79, 241103 (2009).
- G. Galli and M. Parrinello, Phys. Rev. Lett. 69, 3547 (1992). [MEDLINE] [CAS]
- F. Mauri and G. Galli, Phys. Rev. B 50, 4316 (1994). [MEDLINE]
- P. Ordejón, D. A. Drabold, R. M. Martin, and M. P. Grumbach, Phys. Rev. B 51, 1456 (1995). [MEDLINE]
- E. Hernández and M. J. Gillan, Phys. Rev. B 51, 10157 (1995). [MEDLINE]
- J.-L. Fattebert and J. Bernholc, Phys. Rev. B 62, 1713 (2000).
- C.-K. Skylaris, A. A. Mostofi, P. D. Haynes, O. Dieguez, and M. C. Payne, Phys. Rev. B 66, 035119 (2002). [ISI]
- C.-K. Skylaris, A. A. Mostofi, P. D. Haynes, C. J. Pickard, and M. C. Payne, Comput. Phys. Commun. 140, 315 (2001). [Inspec] [ISI]
- N. D. M. Hine, P. D. Haynes, A. A. Mostofi, C.-K. Skylaris, and M. C. Payne, Comput. Phys. Commun. 180, 1041 (2009). [Inspec] [CAS]
- L. S. Blackford, J. Choi, A. Cleary, E. D'Azevedo, J. Demmel, I. Dhillon, J. Dongarra, S. Hammarling, G. Henry, A. Petitet, K. Stanley, D. Walker, and R. C. Whaley, ScaLAPACK Users' Guide (Society for Industrial and Applied Mathematics, 1997).
- T. Ozaki, Phys. Rev. B 64, 195110 (2001).
- H. Hellmann, Einführung in die Quantenchemie (Deuticke, Leipzig, 1937).
- R. P. Feynman, Phys. Rev. 56, 340 (1939).
- N. D. M. Hine, M. Robinson, P. D. Haynes, C.-K. Skylaris, M. C. Payne, and A. A. Mostofi, Phys. Rev. B 83, 195102 (2011).
- P. Pulay, Mol. Phys. 17, 197 (1969).
- A. Ruiz-Serrano, N. D. M. Hine, and C. K. Skylaris, J. Chem. Phys. 136, 234101 (2012)JCPSA6000136000023234101000001.
- M. Weinert and J. W. Davenport, Phys. Rev. B 45, 13709 (1992). [MEDLINE]
- R. W. Warren and B. I. Dunlap, Chem. Phys. Lett. 262, 384 (1996). [Inspec] [ISI] [CAS]
- A. M. N. Niklasson, J. Chem. Phys. 129, 244107 (2008).
- G. P. Kerker, Phys. Rev. B 23, 3082 (1981). [ISI]
- P. O. Lowdin, J. Chem. Phys. 18, 365 (1950)JCPSA6000018000003000365000001.
- C. K. Gan, P. D. Haynes, and M. C. Payne, Comput. Phys. Commun. 134, 33 (2001). [Inspec] [ISI]
- C. A. White, P. Maslen, M. S. Lee, and M. Head-Gordon, Chem. Phys. Lett. 276, 133 (1997). [Inspec] [ISI] [CAS]
- A. A. Mostofi, P. D. Haynes, C. K. Skylaris, and M. C. Payne, J. Chem. Phys. 119, 8842 (2003)JCPSA6000119000017008842000001. [ISI]
- A. A. Mostofi, C.-K. Skylaris, P. D. Haynes, and M. C. Payne, Comput. Phys. Commun. 147, 788 (2002).
- J. P. Perdew, K. Burke, and M. Ernzerhof, Phys. Rev. Lett. 77, 3865 (1996).
- B. G. Pfrommer, M. Cote, S. G. Louie, and M. L. Cohen, J. Comput. Phys. 131, 233 (1997).
- L. E. Ratcliff, N. D. M. Hine, and P. D. Haynes, Phys. Rev. B 84, 165131 (2011).
- C.-K. Skylaris and P. D. Haynes, J. Chem. Phys. 127, 164712 (2007)JCPSA6000127000016164712000001. [MEDLINE]
- B. Hammer, L. B. Hansen, and J. K. Norskov, Phys. Rev. B 59, 7413 (1999).
- H. J. Monkhorst and J. D. Pack, Phys. Rev. B 13, 5188 (1976). [Inspec]
- F. Birch, Phys. Rev. 71, 809 (1947).
References
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