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Promoter methylation patterns in Richter syndrome affect stem-cell maintenance and cell cycle regulation and differ from de novo diffuse large B-cell lymphoma

Promoter methylation patterns in Richter syndrome affect stem-cell maintenance and cell cycle regulation and differ from de novo diffuse large B-cell lymphoma
Promoter methylation patterns in Richter syndrome affect stem-cell maintenance and cell cycle regulation and differ from de novo diffuse large B-cell lymphoma
In a fraction of patients, chronic lymphocytic leukaemia (CLL) can transform to Richter syndrome (RS), usually a diffuse large B-cell lymphoma (DLBCL). We studied genome-wide promoter DNA methylation in RS and clonally related CLL-phases of transformed patients, alongside de novo DLBCL (of non-germinal centre B type), untransformed-CLL and normal B-cells. The greatest differences in global DNA methylation levels were observed between RS and DLBCL, indicating that these two diseases, although histologically similar, are epigenetically distinct. RS was more highly methylated for genes involved in cell cycle regulation. When RS was compared to the preceding CLL-phase and with untransformed-CLL, RS presented a higher degree of methylation for genes possessing the H3K27me3 mark and PRC2 targets, as well as for gene targets of TP53 and RB1. Comparison of the methylation levels of individual genes revealed that OSM, a stem cell regulatory gene, exhibited significantly higher methylation levels in RS compared to CLL-phases. Its transcriptional repression by DNA methylation was confirmed by 5-aza-2'deoxycytidine treatment of DLBCL cells, determining an increased OSM expression. Our results showed that methylation patterns in RS are largely different from de novo DLBCL. Stem cell-related genes and cell cycle regulation genes are targets of DNA methylation in RS.
histological transformation, TP53, CDKN2A, WT1, chronic lymphocytic leukaemia
0007-1048
194-204
Rinaldi, Andrea
ae4d2559-25e9-47b8-8c77-308f6cb2a5c4
Mensah, Afua Adjeiwaa
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Kwee, Ivo
0926a658-8296-4ba4-9a70-abcf8a1aad96
Forconi, Francesco
ce9ed873-58cf-4876-bf3a-9ba1d163edc8
Orlandi, Ester M.
ff07f7b0-e1c5-4cf1-b44a-a2f5d54f916c
Lucioni, Marco
0c4b8c35-5f92-4cc0-84d3-7e7860983d07
Gattei, Valter
df828ae8-1b40-4acb-8908-5a6b3d16cf99
Marasca, Roberto
918148d0-8f99-4a29-8322-1b34f6d7dd00
Berger, Françoise
1a082b42-3181-4004-a290-97178ef2564a
Cogliatti, Sergio
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Cavalli, Franco
ce699517-7deb-4bad-8b14-afe749884b9e
Zucca, Emanuele
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Gaidano, Gianluca
1a6a7107-107b-4891-82e0-5fedadd2f65a
Rossi, Davide
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Bertoni, Francesco
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Rinaldi, Andrea
ae4d2559-25e9-47b8-8c77-308f6cb2a5c4
Mensah, Afua Adjeiwaa
a67cf26b-4e10-4ef3-83fd-4cd25a8d5242
Kwee, Ivo
0926a658-8296-4ba4-9a70-abcf8a1aad96
Forconi, Francesco
ce9ed873-58cf-4876-bf3a-9ba1d163edc8
Orlandi, Ester M.
ff07f7b0-e1c5-4cf1-b44a-a2f5d54f916c
Lucioni, Marco
0c4b8c35-5f92-4cc0-84d3-7e7860983d07
Gattei, Valter
df828ae8-1b40-4acb-8908-5a6b3d16cf99
Marasca, Roberto
918148d0-8f99-4a29-8322-1b34f6d7dd00
Berger, Françoise
1a082b42-3181-4004-a290-97178ef2564a
Cogliatti, Sergio
7f5f211b-10e1-4c74-91c1-02e07b0b6cf3
Cavalli, Franco
ce699517-7deb-4bad-8b14-afe749884b9e
Zucca, Emanuele
40bd5950-d74e-4169-a2ea-0bfc1058058e
Gaidano, Gianluca
1a6a7107-107b-4891-82e0-5fedadd2f65a
Rossi, Davide
b4b2506d-794c-4c79-8b2d-6767554fd52a
Bertoni, Francesco
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Rinaldi, Andrea, Mensah, Afua Adjeiwaa, Kwee, Ivo, Forconi, Francesco, Orlandi, Ester M., Lucioni, Marco, Gattei, Valter, Marasca, Roberto, Berger, Françoise, Cogliatti, Sergio, Cavalli, Franco, Zucca, Emanuele, Gaidano, Gianluca, Rossi, Davide and Bertoni, Francesco (2013) Promoter methylation patterns in Richter syndrome affect stem-cell maintenance and cell cycle regulation and differ from de novo diffuse large B-cell lymphoma. British Journal of Haematology, 163 (2), 194-204. (doi:10.1111/bjh.12515). (PMID:23961875)

Record type: Article

Abstract

In a fraction of patients, chronic lymphocytic leukaemia (CLL) can transform to Richter syndrome (RS), usually a diffuse large B-cell lymphoma (DLBCL). We studied genome-wide promoter DNA methylation in RS and clonally related CLL-phases of transformed patients, alongside de novo DLBCL (of non-germinal centre B type), untransformed-CLL and normal B-cells. The greatest differences in global DNA methylation levels were observed between RS and DLBCL, indicating that these two diseases, although histologically similar, are epigenetically distinct. RS was more highly methylated for genes involved in cell cycle regulation. When RS was compared to the preceding CLL-phase and with untransformed-CLL, RS presented a higher degree of methylation for genes possessing the H3K27me3 mark and PRC2 targets, as well as for gene targets of TP53 and RB1. Comparison of the methylation levels of individual genes revealed that OSM, a stem cell regulatory gene, exhibited significantly higher methylation levels in RS compared to CLL-phases. Its transcriptional repression by DNA methylation was confirmed by 5-aza-2'deoxycytidine treatment of DLBCL cells, determining an increased OSM expression. Our results showed that methylation patterns in RS are largely different from de novo DLBCL. Stem cell-related genes and cell cycle regulation genes are targets of DNA methylation in RS.

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More information

e-pub ahead of print date: 21 August 2013
Published date: October 2013
Keywords: histological transformation, TP53, CDKN2A, WT1, chronic lymphocytic leukaemia
Organisations: Cancer Sciences

Identifiers

Local EPrints ID: 358097
URI: http://eprints.soton.ac.uk/id/eprint/358097
ISSN: 0007-1048
PURE UUID: b989d379-00dd-4be7-9ff4-4d74b3b3c1e2
ORCID for Francesco Forconi: ORCID iD orcid.org/0000-0002-2211-1831

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Date deposited: 04 Oct 2013 08:50
Last modified: 15 Mar 2024 03:40

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Contributors

Author: Andrea Rinaldi
Author: Afua Adjeiwaa Mensah
Author: Ivo Kwee
Author: Ester M. Orlandi
Author: Marco Lucioni
Author: Valter Gattei
Author: Roberto Marasca
Author: Françoise Berger
Author: Sergio Cogliatti
Author: Franco Cavalli
Author: Emanuele Zucca
Author: Gianluca Gaidano
Author: Davide Rossi
Author: Francesco Bertoni

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