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Data in support of 'Characterization of the watercress (Nasturtium officinale R. Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health

Data in support of 'Characterization of the watercress (Nasturtium officinale R. Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health
Data in support of 'Characterization of the watercress (Nasturtium officinale R. Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health
The watercress transcriptome was described in this manuscript for the first time through de novo RNASeq data assembly (Trinity), annotation, and differential expression analysis. These tables contain the data produced by the above analysis. Specifically: Supplement Table 1 compiles loci annotation and differential expression results, whereas Supplement Table 2 and 3 contain the raw expression data used in differential expression analysis for plant antioxidant capacity and glucosinolate content respectively. For further information on the analysis and results, please see the publication: Voutsina et al. (2016) Characterization of the watercress (Nasturtium officinale R Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health, BMC Genomics http://dx.doi.org/10.1186/s12864-016-2704-4 http://eprints.soton.ac.uk/394514/
watercress, nasturtium officinale, brassicaceae, RNAseq, de novo assesmbly, differential expression, antioxidant capacity, glucosinolates, gluconasturtiin, phenylpropanoid
University of Southampton
Voutsina, Nikol
68a57328-0a4b-4f72-a17d-d3e77f7240f7
Chapman, Mark
8bac4a92-bfa7-4c3c-af29-9af852ef6383
Taylor, Gail
f3851db9-d37c-4c36-8663-e5c2cb03e171
Voutsina, Nikol
68a57328-0a4b-4f72-a17d-d3e77f7240f7
Chapman, Mark
8bac4a92-bfa7-4c3c-af29-9af852ef6383
Taylor, Gail
f3851db9-d37c-4c36-8663-e5c2cb03e171

Voutsina, Nikol, Chapman, Mark and Taylor, Gail (2016) Data in support of 'Characterization of the watercress (Nasturtium officinale R. Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health. University of Southampton doi:10.5258/SOTON/394656 [Dataset]

Record type: Dataset

Abstract

The watercress transcriptome was described in this manuscript for the first time through de novo RNASeq data assembly (Trinity), annotation, and differential expression analysis. These tables contain the data produced by the above analysis. Specifically: Supplement Table 1 compiles loci annotation and differential expression results, whereas Supplement Table 2 and 3 contain the raw expression data used in differential expression analysis for plant antioxidant capacity and glucosinolate content respectively. For further information on the analysis and results, please see the publication: Voutsina et al. (2016) Characterization of the watercress (Nasturtium officinale R Br.; Brassicaceae) transcriptome using RNASeq and identification of candidate genes for important phytonutrient traits linked to human health, BMC Genomics http://dx.doi.org/10.1186/s12864-016-2704-4 http://eprints.soton.ac.uk/394514/

Spreadsheet
Supplement_Table_1.xlsx - Dataset
Available under License Creative Commons Attribution.
Download (12MB)
Spreadsheet
Supplement_Table_2.xlsx - Dataset
Available under License Creative Commons Attribution.
Download (6MB)
Spreadsheet
Supplement_Table_3.xlsx - Dataset
Available under License Creative Commons Attribution.
Download (4MB)

More information

Published date: 2016
Keywords: watercress, nasturtium officinale, brassicaceae, RNAseq, de novo assesmbly, differential expression, antioxidant capacity, glucosinolates, gluconasturtiin, phenylpropanoid
Organisations: Centre for Biological Sciences, Environmental

Identifiers

Local EPrints ID: 394656
URI: http://eprints.soton.ac.uk/id/eprint/394656
PURE UUID: 74167ea3-d893-4698-912f-7af676977c23
ORCID for Mark Chapman: ORCID iD orcid.org/0000-0002-7151-723X
ORCID for Gail Taylor: ORCID iD orcid.org/0000-0001-8470-6390

Catalogue record

Date deposited: 23 May 2016 16:30
Last modified: 13 Dec 2021 03:10

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Contributors

Creator: Nikol Voutsina
Creator: Mark Chapman ORCID iD
Creator: Gail Taylor ORCID iD

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