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Systematic review of lung function and COPD with peripheral blood DNA methylation in population based studies

Systematic review of lung function and COPD with peripheral blood DNA methylation in population based studies
Systematic review of lung function and COPD with peripheral blood DNA methylation in population based studies

BACKGROUND: Epigenetic variations in peripheral blood have potential as biomarkers for disease. This systematic review assesses the association of lung function and chronic obstructive pulmonary disease (COPD) with DNA methylation profiles in peripheral blood from population-based studies.

METHODS: Online databases Medline, Embase, and Web of Science were searched. Google Scholar was searched to identify grey literature. After removing duplicate articles, 1155 articles were independently screened by two investigators. Peer reviewed reports on population-based studies that examined peripheral blood DNA methylation in participants with measured lung function (FEV1, FEV1/FVC ratio) or known COPD status were selected for full-text review. Six articles were suitable for inclusion. Information regarding study characteristics, designs, methodologies and conclusions was extracted. A narrative synthesis was performed based on published results.

RESULTS: Three of the six articles assessed the association of COPD with DNA methylation, and two of these also included associations with lung function. Overall, five reports examined the association of lung function with DNA methylation profiles. Five of the six articles reported 'significant' results. However, no consistent CpG sites were identified across studies for COPD status or lung function values.

CONCLUSIONS: DNA methylation patterns in peripheral blood from individuals with reduced lung function or COPD may be different to those in people with normal lung function. However, this systematic review did not find any consistent associations of lung function or COPD with differentially methylated CpG sites. Large studies with a longitudinal design to address reverse causality may prove a more fruitful area of research.

TRIAL REGISTRATION: PROSPERO 2016: CRD42016037352 .

Journal Article
1471-2466
Machin, Matthew
4e6e65b2-9146-4fee-a85b-15da71d32feb
Amaral, André F.S.
dbecedaa-04b7-43da-9bcb-c4e1f3e471fc
Wielscher, Matthias
7ab47d0b-aa3a-43a3-8086-c6b980e56746
Rezwan, Faisal I.
203f8f38-1f5d-485b-ab11-c546b4276338
Imboden, Medea
7ac4495d-e803-4e18-b6ba-318da568f776
Jarvelin, Marjo-Riitta
54bf0cc8-8f32-47db-b22d-6e694f1c1b26
Adcock, Ian M.
427153bc-3b8b-4066-aa4e-5bc41a6c36dd
Probst-Hensch, Nicole
33ee3cca-a1d4-4157-87c3-20ebfd84406f
Holloway, John W.
4bbd77e6-c095-445d-a36b-a50a72f6fe1a
Jarvis, Deborah L.
9e8ece92-3265-42e4-9240-2beccacb00cd
ALEC study
Machin, Matthew
4e6e65b2-9146-4fee-a85b-15da71d32feb
Amaral, André F.S.
dbecedaa-04b7-43da-9bcb-c4e1f3e471fc
Wielscher, Matthias
7ab47d0b-aa3a-43a3-8086-c6b980e56746
Rezwan, Faisal I.
203f8f38-1f5d-485b-ab11-c546b4276338
Imboden, Medea
7ac4495d-e803-4e18-b6ba-318da568f776
Jarvelin, Marjo-Riitta
54bf0cc8-8f32-47db-b22d-6e694f1c1b26
Adcock, Ian M.
427153bc-3b8b-4066-aa4e-5bc41a6c36dd
Probst-Hensch, Nicole
33ee3cca-a1d4-4157-87c3-20ebfd84406f
Holloway, John W.
4bbd77e6-c095-445d-a36b-a50a72f6fe1a
Jarvis, Deborah L.
9e8ece92-3265-42e4-9240-2beccacb00cd

Machin, Matthew, Amaral, André F.S., Wielscher, Matthias, Rezwan, Faisal I., Imboden, Medea, Jarvelin, Marjo-Riitta, Adcock, Ian M., Probst-Hensch, Nicole, Holloway, John W. and Jarvis, Deborah L. , ALEC study (2017) Systematic review of lung function and COPD with peripheral blood DNA methylation in population based studies. BMC Pulmonary Medicine, 17 (54). (doi:10.1186/s12890-017-0397-3).

Record type: Article

Abstract

BACKGROUND: Epigenetic variations in peripheral blood have potential as biomarkers for disease. This systematic review assesses the association of lung function and chronic obstructive pulmonary disease (COPD) with DNA methylation profiles in peripheral blood from population-based studies.

METHODS: Online databases Medline, Embase, and Web of Science were searched. Google Scholar was searched to identify grey literature. After removing duplicate articles, 1155 articles were independently screened by two investigators. Peer reviewed reports on population-based studies that examined peripheral blood DNA methylation in participants with measured lung function (FEV1, FEV1/FVC ratio) or known COPD status were selected for full-text review. Six articles were suitable for inclusion. Information regarding study characteristics, designs, methodologies and conclusions was extracted. A narrative synthesis was performed based on published results.

RESULTS: Three of the six articles assessed the association of COPD with DNA methylation, and two of these also included associations with lung function. Overall, five reports examined the association of lung function with DNA methylation profiles. Five of the six articles reported 'significant' results. However, no consistent CpG sites were identified across studies for COPD status or lung function values.

CONCLUSIONS: DNA methylation patterns in peripheral blood from individuals with reduced lung function or COPD may be different to those in people with normal lung function. However, this systematic review did not find any consistent associations of lung function or COPD with differentially methylated CpG sites. Large studies with a longitudinal design to address reverse causality may prove a more fruitful area of research.

TRIAL REGISTRATION: PROSPERO 2016: CRD42016037352 .

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More information

Accepted/In Press date: 16 March 2017
e-pub ahead of print date: 20 March 2017
Published date: 20 March 2017
Keywords: Journal Article
Organisations: Human Development & Health, Epigenetics

Identifiers

Local EPrints ID: 407142
URI: http://eprints.soton.ac.uk/id/eprint/407142
ISSN: 1471-2466
PURE UUID: 40235420-c200-4675-b3b3-91354bb3261b
ORCID for Faisal I. Rezwan: ORCID iD orcid.org/0000-0001-9921-222X
ORCID for John W. Holloway: ORCID iD orcid.org/0000-0001-9998-0464

Catalogue record

Date deposited: 30 Mar 2017 01:08
Last modified: 16 Mar 2024 04:13

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Contributors

Author: Matthew Machin
Author: André F.S. Amaral
Author: Matthias Wielscher
Author: Faisal I. Rezwan ORCID iD
Author: Medea Imboden
Author: Marjo-Riitta Jarvelin
Author: Ian M. Adcock
Author: Nicole Probst-Hensch
Author: Deborah L. Jarvis
Corporate Author: ALEC study

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