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Eliminating antibody polyreactivity through addition of N-linked glycosylation

Eliminating antibody polyreactivity through addition of N-linked glycosylation
Eliminating antibody polyreactivity through addition of N-linked glycosylation

Antibody polyreactivity can be an obstacle to translating a candidate antibody into a clinical product. Standard tests such as antibody binding to cardiolipin, HEp-2 cells, or nuclear antigens provide measures of polyreactivity, but its causes and the means to resolve are often unclear. Here we present a method for eliminating antibody polyreactivity through the computational design and genetic addition of N-linked glycosylation near known sites of polyreactivity. We used the HIV-1-neutralizing antibody, VRC07, as a test case, since efforts to increase VRC07 potency at three spatially distinct sites resulted in enhanced polyreactivity. The addition of N-linked glycans proximal to the polyreactivity-enhancing mutations at each of the spatially distinct sites resulted in reduced antibody polyreactivity as measured by (i) anti-cardiolipin ELISA, (ii) Luminex AtheNA Multi-Lyte ANA binding, and (iii) HEp-2 cell staining. The reduced polyreactivity trended with increased antibody concentration over time in mice, but not with improved overall protein stability as measured by differential scanning calorimetry. Moreover, glycan proximity to the site of polyreactivity appeared to be a critical factor. The results provide evidence that antibody polyreactivity can result from local, rather than global, features of an antibody and that addition of N-linked glycosylation can be an effective approach to reducing antibody polyreactivity.

antibody engineering, bioinformatics, broadly neutralizing antibody, glycan engineering, polyreactivity
0961-8368
1019-1030
Chuang, Gwo Yu
27a1eef0-7417-444f-8818-1b0e27a11fcb
Zhang, Baoshan
af764e4a-063b-42c3-b20c-0db274f4ca4a
McKee, Krisha
cdfc6a73-1be8-4d90-85da-6ce5e301f5d5
O'Dell, Sijy
d92f9478-2523-455d-a8d0-b7d9b0d72b93
Kwon, Young Do
3e8c3dcd-214c-4771-90f4-b36ede48d763
Zhou, Tongqing
8d991d8e-9759-4f97-99f5-c8b3e615808e
Blinn, Julie
08bf04a3-9cbc-4b0f-b666-67baf4906fa1
Lloyd, Krissey
8f9664bf-77d7-4566-9823-4a7811a29773
Parks, Robert
f70ca3cc-1c0c-456e-9e4d-054aef21bf66
Von Holle, Tarra
f72d1662-d693-4315-a903-248d42f27c64
Ko, Sung Youl
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Kong, Wing Pui
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Pegu, Amarendra
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Wang, Keyun
d1a1eae5-5d0d-4d83-8237-90558df90762
Baruah, Kavitha
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Crispin, Max
cd980957-0943-4b89-b2b2-710f01f33bc9
Mascola, John R.
8204b677-dc9d-4a84-9693-1cc8d6e4e7d1
Moody, M. Anthony
9d1da79b-cd90-4336-a801-a2579011746f
Haynes, Barton F.
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Georgiev, Ivelin S.
8bb81a78-3cf2-4362-9f58-c0674d6f3fe1
Kwong, Peter D.
f0c611d8-ea9f-416c-a7a7-4c57ba4bdd82
Chuang, Gwo Yu
27a1eef0-7417-444f-8818-1b0e27a11fcb
Zhang, Baoshan
af764e4a-063b-42c3-b20c-0db274f4ca4a
McKee, Krisha
cdfc6a73-1be8-4d90-85da-6ce5e301f5d5
O'Dell, Sijy
d92f9478-2523-455d-a8d0-b7d9b0d72b93
Kwon, Young Do
3e8c3dcd-214c-4771-90f4-b36ede48d763
Zhou, Tongqing
8d991d8e-9759-4f97-99f5-c8b3e615808e
Blinn, Julie
08bf04a3-9cbc-4b0f-b666-67baf4906fa1
Lloyd, Krissey
8f9664bf-77d7-4566-9823-4a7811a29773
Parks, Robert
f70ca3cc-1c0c-456e-9e4d-054aef21bf66
Von Holle, Tarra
f72d1662-d693-4315-a903-248d42f27c64
Ko, Sung Youl
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Kong, Wing Pui
2b862af1-d43b-44da-b422-eb51a4f1454f
Pegu, Amarendra
79595ba5-cb5a-4f0d-8f7f-380f395eed8f
Wang, Keyun
d1a1eae5-5d0d-4d83-8237-90558df90762
Baruah, Kavitha
a02f59f3-5e0f-4735-9fdd-639bdbb8f563
Crispin, Max
cd980957-0943-4b89-b2b2-710f01f33bc9
Mascola, John R.
8204b677-dc9d-4a84-9693-1cc8d6e4e7d1
Moody, M. Anthony
9d1da79b-cd90-4336-a801-a2579011746f
Haynes, Barton F.
7df4fb4a-639a-4e08-b29d-01d83db9be50
Georgiev, Ivelin S.
8bb81a78-3cf2-4362-9f58-c0674d6f3fe1
Kwong, Peter D.
f0c611d8-ea9f-416c-a7a7-4c57ba4bdd82

Chuang, Gwo Yu, Zhang, Baoshan, McKee, Krisha, O'Dell, Sijy, Kwon, Young Do, Zhou, Tongqing, Blinn, Julie, Lloyd, Krissey, Parks, Robert, Von Holle, Tarra, Ko, Sung Youl, Kong, Wing Pui, Pegu, Amarendra, Wang, Keyun, Baruah, Kavitha, Crispin, Max, Mascola, John R., Moody, M. Anthony, Haynes, Barton F., Georgiev, Ivelin S. and Kwong, Peter D. (2015) Eliminating antibody polyreactivity through addition of N-linked glycosylation. Protein Science, 24 (6), 1019-1030. (doi:10.1002/pro.2682).

Record type: Article

Abstract

Antibody polyreactivity can be an obstacle to translating a candidate antibody into a clinical product. Standard tests such as antibody binding to cardiolipin, HEp-2 cells, or nuclear antigens provide measures of polyreactivity, but its causes and the means to resolve are often unclear. Here we present a method for eliminating antibody polyreactivity through the computational design and genetic addition of N-linked glycosylation near known sites of polyreactivity. We used the HIV-1-neutralizing antibody, VRC07, as a test case, since efforts to increase VRC07 potency at three spatially distinct sites resulted in enhanced polyreactivity. The addition of N-linked glycans proximal to the polyreactivity-enhancing mutations at each of the spatially distinct sites resulted in reduced antibody polyreactivity as measured by (i) anti-cardiolipin ELISA, (ii) Luminex AtheNA Multi-Lyte ANA binding, and (iii) HEp-2 cell staining. The reduced polyreactivity trended with increased antibody concentration over time in mice, but not with improved overall protein stability as measured by differential scanning calorimetry. Moreover, glycan proximity to the site of polyreactivity appeared to be a critical factor. The results provide evidence that antibody polyreactivity can result from local, rather than global, features of an antibody and that addition of N-linked glycosylation can be an effective approach to reducing antibody polyreactivity.

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More information

Accepted/In Press date: 12 March 2015
e-pub ahead of print date: 12 May 2015
Published date: 1 June 2015
Keywords: antibody engineering, bioinformatics, broadly neutralizing antibody, glycan engineering, polyreactivity

Identifiers

Local EPrints ID: 414323
URI: http://eprints.soton.ac.uk/id/eprint/414323
ISSN: 0961-8368
PURE UUID: ee0dc1ff-acc9-458b-a007-4170b52902f9
ORCID for Max Crispin: ORCID iD orcid.org/0000-0002-1072-2694

Catalogue record

Date deposited: 26 Sep 2017 16:30
Last modified: 16 Mar 2024 04:30

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Contributors

Author: Gwo Yu Chuang
Author: Baoshan Zhang
Author: Krisha McKee
Author: Sijy O'Dell
Author: Young Do Kwon
Author: Tongqing Zhou
Author: Julie Blinn
Author: Krissey Lloyd
Author: Robert Parks
Author: Tarra Von Holle
Author: Sung Youl Ko
Author: Wing Pui Kong
Author: Amarendra Pegu
Author: Keyun Wang
Author: Kavitha Baruah
Author: Max Crispin ORCID iD
Author: John R. Mascola
Author: M. Anthony Moody
Author: Barton F. Haynes
Author: Ivelin S. Georgiev
Author: Peter D. Kwong

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