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Towards a grid-enabled biomolecular simulation database

Wu, Bing, Tai, Kaihsu, Ng, Muan Hong, Johnston, Steven, Murdock, Stuart, Fangohr, Hans, Sansom, Mark S.P., Essex, Jonathan, Jeffreys, Paul and Cox, Simon (2005) Towards a grid-enabled biomolecular simulation database In Proceedings of the UK e-Science All Hands Meeting 2005. Engineering and Physical Sciences Research Council., 4pp.

Record type: Conference or Workshop Item (Paper)

Abstract

The overall aim of the BioSimGrid project is to build a distributed data and computing platform to enable large scale analysis of the results of biomolecular simulations. To address the challenges of distributed computing on large amounts of simulation data, we have built an open software framework system based on off-the-shelf middleware, SRB (Storage Resource Broker) and the distributed enterprise database, Oracle 10g. We describe the implementation details: architecure, data distribution, security, and implemented analysis modules. We outline two examples, among many more, where BioSimGrid is a necessary tool.

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More information

Published date: 2005
Venue - Dates: Proceedings of the UK e-Science All Hands Meeting 2005, 2005-09-19 - 2005-09-22

Identifiers

Local EPrints ID: 41989
URI: http://eprints.soton.ac.uk/id/eprint/41989
ISBN: 1904425534
PURE UUID: dfe5eac9-e4bd-4f0a-abe2-62d2bab46bf7
ORCID for Steven Johnston: ORCID iD orcid.org/0000-0003-3864-7072
ORCID for Jonathan Essex: ORCID iD orcid.org/0000-0003-2639-2746

Catalogue record

Date deposited: 26 Oct 2006
Last modified: 17 Jul 2017 15:25

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Contributors

Author: Bing Wu
Author: Kaihsu Tai
Author: Muan Hong Ng
Author: Steven Johnston ORCID iD
Author: Stuart Murdock
Author: Hans Fangohr
Author: Mark S.P. Sansom
Author: Jonathan Essex ORCID iD
Author: Paul Jeffreys
Author: Simon Cox

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