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Design and application of the Microscopy Image Analysis Tool

Design and application of the Microscopy Image Analysis Tool
Design and application of the Microscopy Image Analysis Tool

Advancements in microscopy instrumentation have resulted in larger volumes of acquired image data and, consequently, increased memory and space requirements for the processing and storage of the data. To address the issue in software, the Microscopy Image Analysis Tool (MIATool) was created to support processing of large image sets that makes efficient use of available resources. Implemented in MATLAB using object-oriented design, MIATool works with image pointer arrays to utilize RAM effectively and to support the analysis of different interpretations of data. Furthermore, the software provides image editing tools which operate on parameter objects that are saved in lieu of processed images to exploit the available disk space. A detailed image analysis example is given to illustrate the design and features of MIATool.

94-97
Institute of Electrical and Electronics Engineers Inc.
Chao, Jerry
550e20b0-8365-42e3-a6fc-1048eb8c2e47
Long, Palmer
73d3c361-9c05-4e91-a676-d8e660524d35
Sally Ward, E.
b31c0877-8abe-485f-b800-244a9d3cd6cc
Ober, Raimund J.
31f4d47f-fb49-44f5-8ff6-87fc4aff3d36
Chao, Jerry
550e20b0-8365-42e3-a6fc-1048eb8c2e47
Long, Palmer
73d3c361-9c05-4e91-a676-d8e660524d35
Sally Ward, E.
b31c0877-8abe-485f-b800-244a9d3cd6cc
Ober, Raimund J.
31f4d47f-fb49-44f5-8ff6-87fc4aff3d36

Chao, Jerry, Long, Palmer, Sally Ward, E. and Ober, Raimund J. (2007) Design and application of the Microscopy Image Analysis Tool. In 2007 IEEE Dallas Engineering in Medicine and Biology Workshop, DEMBS. Institute of Electrical and Electronics Engineers Inc. pp. 94-97 . (doi:10.1109/EMBSW.2007.4454182).

Record type: Conference or Workshop Item (Paper)

Abstract

Advancements in microscopy instrumentation have resulted in larger volumes of acquired image data and, consequently, increased memory and space requirements for the processing and storage of the data. To address the issue in software, the Microscopy Image Analysis Tool (MIATool) was created to support processing of large image sets that makes efficient use of available resources. Implemented in MATLAB using object-oriented design, MIATool works with image pointer arrays to utilize RAM effectively and to support the analysis of different interpretations of data. Furthermore, the software provides image editing tools which operate on parameter objects that are saved in lieu of processed images to exploit the available disk space. A detailed image analysis example is given to illustrate the design and features of MIATool.

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More information

Published date: 2007
Venue - Dates: 2007 IEEE Dallas Engineering in Medicine and Biology Workshop, Richardson, TX, United States, 2007-11-11 - 2007-11-12

Identifiers

Local EPrints ID: 423590
URI: https://eprints.soton.ac.uk/id/eprint/423590
PURE UUID: 1ae3ac0c-0be8-40cd-b59c-2fd17ad6e297
ORCID for E. Sally Ward: ORCID iD orcid.org/0000-0003-3232-7238
ORCID for Raimund J. Ober: ORCID iD orcid.org/0000-0002-1290-7430

Catalogue record

Date deposited: 27 Sep 2018 16:30
Last modified: 20 Jul 2019 00:22

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Contributors

Author: Jerry Chao
Author: Palmer Long
Author: E. Sally Ward ORCID iD
Author: Raimund J. Ober ORCID iD

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