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PRR14L mutations are associated with chromosome 22 acquired uniparental disomy, age related clonal hermatopoiesis and myeloid neoplasia

PRR14L mutations are associated with chromosome 22 acquired uniparental disomy, age related clonal hermatopoiesis and myeloid neoplasia
PRR14L mutations are associated with chromosome 22 acquired uniparental disomy, age related clonal hermatopoiesis and myeloid neoplasia
Acquired uniparental disomy (aUPD, also known as copy-neutral loss of heterozygosity) is a common feature of cancer cells and characterized by extended tracts of somatically-acquired homozygosity without any concurrent loss or gain of genetic material. The presumed genetic targets of many regions of aUPD remain unknown. Here we describe the association of chromosome 22 aUPD with mutations that delete the C-terminus of PRR14L in patients with chronic myelomonocytic leukemia (CMML), related myeloid neoplasms and age-related clonal hematopoiesis (ARCH). Myeloid panel analysis identified a median of three additional mutated genes (range 1–6) in cases with a myeloid neoplasm (n = 8), but no additional mutations in cases with ARCH (n = 2) suggesting that mutated PRR14L alone may be sufficient to drive clonality. PRR14L has very limited homology to other proteins and its function is unknown. ShRNA knockdown of PRR14L in human CD34+ cells followed by in vitro growth and differentiation assays showed an increase in monocytes and decrease in neutrophils, decrease in neutrophils, consistent with a CMML-like phenotype. RNA-Seq and cellular localization studies suggest a role for PRR14L in cell division. PRR14L is thus a novel, biallelically mutated gene and potential founding abnormality in myeloid neoplasms.
0887-6924
1184-1194
Chase, Andrew
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Pellagatti, Andrea
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Singh, Shalini
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Score, Joannah
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Tapper, William J.
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Lin, Feng
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Hoade, Yvette M.
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Bryant, Catherine
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Trim, Nicola
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Yip, Bon Ham
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Zoi, Katerina
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Rasi, Chiara
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Forsberg, Lars A.
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Dumanski, Jan P.
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Boultwood, Jacqueline
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Cross, Nicholas C.P.
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Chase, Andrew
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Pellagatti, Andrea
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Singh, Shalini
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Score, Joannah
ea0db6ef-c17e-4915-b216-ac67c07b26b7
Tapper, William J.
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Lin, Feng
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Hoade, Yvette M.
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Bryant, Catherine
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Trim, Nicola
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Yip, Bon Ham
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Zoi, Katerina
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Rasi, Chiara
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Forsberg, Lars A.
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Dumanski, Jan P.
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Boultwood, Jacqueline
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Cross, Nicholas C.P.
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Chase, Andrew, Pellagatti, Andrea, Singh, Shalini, Score, Joannah, Tapper, William J., Lin, Feng, Hoade, Yvette M., Bryant, Catherine, Trim, Nicola, Yip, Bon Ham, Zoi, Katerina, Rasi, Chiara, Forsberg, Lars A., Dumanski, Jan P., Boultwood, Jacqueline and Cross, Nicholas C.P. (2019) PRR14L mutations are associated with chromosome 22 acquired uniparental disomy, age related clonal hermatopoiesis and myeloid neoplasia. Leukemia, 33 (5), 1184-1194. (doi:10.1038/s41375-018-0340-5).

Record type: Article

Abstract

Acquired uniparental disomy (aUPD, also known as copy-neutral loss of heterozygosity) is a common feature of cancer cells and characterized by extended tracts of somatically-acquired homozygosity without any concurrent loss or gain of genetic material. The presumed genetic targets of many regions of aUPD remain unknown. Here we describe the association of chromosome 22 aUPD with mutations that delete the C-terminus of PRR14L in patients with chronic myelomonocytic leukemia (CMML), related myeloid neoplasms and age-related clonal hematopoiesis (ARCH). Myeloid panel analysis identified a median of three additional mutated genes (range 1–6) in cases with a myeloid neoplasm (n = 8), but no additional mutations in cases with ARCH (n = 2) suggesting that mutated PRR14L alone may be sufficient to drive clonality. PRR14L has very limited homology to other proteins and its function is unknown. ShRNA knockdown of PRR14L in human CD34+ cells followed by in vitro growth and differentiation assays showed an increase in monocytes and decrease in neutrophils, decrease in neutrophils, consistent with a CMML-like phenotype. RNA-Seq and cellular localization studies suggest a role for PRR14L in cell division. PRR14L is thus a novel, biallelically mutated gene and potential founding abnormality in myeloid neoplasms.

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Accepted/In Press date: 3 October 2018
e-pub ahead of print date: 20 December 2018
Published date: 1 May 2019

Identifiers

Local EPrints ID: 427203
URI: http://eprints.soton.ac.uk/id/eprint/427203
ISSN: 0887-6924
PURE UUID: a05dcd0b-e17a-47b6-b3fd-a855dc1936b9
ORCID for Andrew Chase: ORCID iD orcid.org/0000-0001-6617-9953
ORCID for William J. Tapper: ORCID iD orcid.org/0000-0002-5896-1889
ORCID for Nicholas C.P. Cross: ORCID iD orcid.org/0000-0001-5481-2555

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Date deposited: 07 Jan 2019 17:30
Last modified: 16 Mar 2024 07:08

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Contributors

Author: Andrew Chase ORCID iD
Author: Andrea Pellagatti
Author: Shalini Singh
Author: Joannah Score
Author: Feng Lin
Author: Yvette M. Hoade
Author: Catherine Bryant
Author: Nicola Trim
Author: Bon Ham Yip
Author: Katerina Zoi
Author: Chiara Rasi
Author: Lars A. Forsberg
Author: Jan P. Dumanski
Author: Jacqueline Boultwood

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