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Universal principles of lineage architecture and stem cell identity in renewing tissues

Universal principles of lineage architecture and stem cell identity in renewing tissues
Universal principles of lineage architecture and stem cell identity in renewing tissues

Adult tissues in multicellular organisms typically contain a variety of stem, progenitor and differentiated cell types arranged in a lineage hierarchy that regulates healthy tissue turnover. Lineage hierarchies in disparate tissues often exhibit common features, yet the general principles regulating their architecture are not known. Here, we provide a formal framework for understanding the relationship between cell molecular 'states' and cell 'types', based on the topology of admissible cell state trajectories. We show that a self-renewing cell type - if defined as suggested by this framework - must reside at the top of any homeostatic renewing lineage hierarchy, and only there. This architecture arises as a natural consequence of homeostasis, and indeed is the only possible way that lineage architectures can be constructed to support homeostasis in renewing tissues. Furthermore, under suitable feedback regulation, for example from the stem cell niche, we show that the property of 'stemness' is entirely determined by the cell environment, in accordance with the notion that stem cell identities are contextual and not determined by hard-wired, cell-intrinsic characteristics.

Cell state, Cell trajectories, Cell type, Self-renewal, Stem cell fate choice, Stem cell lineage
1477-9129
Greulich, Philip
65da32ad-a73a-435a-86e0-e171437430a9
Macarthur, Benjamin
2c0476e7-5d3e-4064-81bb-104e8e88bb6b
Parigini, Cristina
e703096b-49c9-43e6-af7c-62a3a85e9a9b
Sanchez Garcia, Ruben
8246cea2-ae1c-44f2-94e9-bacc9371c3ed
Greulich, Philip
65da32ad-a73a-435a-86e0-e171437430a9
Macarthur, Benjamin
2c0476e7-5d3e-4064-81bb-104e8e88bb6b
Parigini, Cristina
e703096b-49c9-43e6-af7c-62a3a85e9a9b
Sanchez Garcia, Ruben
8246cea2-ae1c-44f2-94e9-bacc9371c3ed

Greulich, Philip, Macarthur, Benjamin, Parigini, Cristina and Sanchez Garcia, Ruben (2021) Universal principles of lineage architecture and stem cell identity in renewing tissues. Development, 148 (11), [dev194399]. (doi:10.1242/DEV.194399).

Record type: Article

Abstract

Adult tissues in multicellular organisms typically contain a variety of stem, progenitor and differentiated cell types arranged in a lineage hierarchy that regulates healthy tissue turnover. Lineage hierarchies in disparate tissues often exhibit common features, yet the general principles regulating their architecture are not known. Here, we provide a formal framework for understanding the relationship between cell molecular 'states' and cell 'types', based on the topology of admissible cell state trajectories. We show that a self-renewing cell type - if defined as suggested by this framework - must reside at the top of any homeostatic renewing lineage hierarchy, and only there. This architecture arises as a natural consequence of homeostasis, and indeed is the only possible way that lineage architectures can be constructed to support homeostasis in renewing tissues. Furthermore, under suitable feedback regulation, for example from the stem cell niche, we show that the property of 'stemness' is entirely determined by the cell environment, in accordance with the notion that stem cell identities are contextual and not determined by hard-wired, cell-intrinsic characteristics.

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Submitted date: 10 March 2020
Accepted/In Press date: 1 April 2021
Published date: 8 June 2021
Additional Information: Funding Information: P.G. is supported by a Medical Research Council New Investigator Research Grant (MR/R026610/1), C.P. is supported by a Studentship of the Institute for Life Sciences (University of Southampton), and P.G, B.D.M. and R.J.S.-G. are partially supported by The Alan Turing Institute (EPSRC grant EP/N510129/1). Publisher Copyright: © 2021. Published by The Company of Biologists Ltd | Development (2021) 148, dev194399.
Keywords: Cell state, Cell trajectories, Cell type, Self-renewal, Stem cell fate choice, Stem cell lineage

Identifiers

Local EPrints ID: 438726
URI: http://eprints.soton.ac.uk/id/eprint/438726
ISSN: 1477-9129
PURE UUID: 674f8266-c03d-4811-b4fa-8fa10d7093d3
ORCID for Philip Greulich: ORCID iD orcid.org/0000-0001-5247-6738
ORCID for Benjamin Macarthur: ORCID iD orcid.org/0000-0002-5396-9750
ORCID for Ruben Sanchez Garcia: ORCID iD orcid.org/0000-0001-6479-3028

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Date deposited: 23 Mar 2020 17:31
Last modified: 17 Mar 2024 05:24

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Contributors

Author: Philip Greulich ORCID iD
Author: Cristina Parigini

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