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A novel framework for phenotyping children with suspected or confirmed infection for future biomarker studies

A novel framework for phenotyping children with suspected or confirmed infection for future biomarker studies
A novel framework for phenotyping children with suspected or confirmed infection for future biomarker studies

Background: The limited diagnostic accuracy of biomarkers in children at risk of a serious bacterial infection (SBI) might be due to the imperfect reference standard of SBI. We aimed to evaluate the diagnostic performance of a new classification algorithm for biomarker discovery in children at risk of SBI. Methods: We used data from five previously published, prospective observational biomarker discovery studies, which included patients aged 0– <16 years: the Alder Hey emergency department (n = 1,120), Alder Hey pediatric intensive care unit (n = 355), Erasmus emergency department (n = 1,993), Maasstad emergency department (n = 714) and St. Mary's hospital (n = 200) cohorts. Biomarkers including procalcitonin (PCT) (4 cohorts), neutrophil gelatinase-associated lipocalin-2 (NGAL) (3 cohorts) and resistin (2 cohorts) were compared for their ability to classify patients according to current standards (dichotomous classification of SBI vs. non-SBI), vs. a proposed PERFORM classification algorithm that assign patients to one of eleven categories. These categories were based on clinical phenotype, test outcomes and C-reactive protein level and accounted for the uncertainty of final diagnosis in many febrile children. The success of the biomarkers was measured by the Area under the receiver operating Curves (AUCs) when they were used individually or in combination. Results: Using the new PERFORM classification system, patients with clinically confident bacterial diagnosis (“definite bacterial” category) had significantly higher levels of PCT, NGAL and resistin compared with those with a clinically confident viral diagnosis (“definite viral” category). Patients with diagnostic uncertainty had biomarker concentrations that varied across the spectrum. AUCs were higher for classification of “definite bacterial” vs. “definite viral” following the PERFORM algorithm than using the “SBI” vs. “non-SBI” classification; summary AUC for PCT was 0.77 (95% CI 0.72–0.82) vs. 0.70 (95% CI 0.65–0.75); for NGAL this was 0.80 (95% CI 0.69–0.91) vs. 0.70 (95% CI 0.58–0.81); for resistin this was 0.68 (95% CI 0.61–0.75) vs. 0.64 (0.58–0.69) The three biomarkers combined had summary AUC of 0.83 (0.77–0.89) for “definite bacterial” vs. “definite viral” infections and 0.71 (0.67–0.74) for “SBI” vs. “non-SBI.” Conclusion: Biomarkers of bacterial infection were strongly associated with the diagnostic categories using the PERFORM classification system in five independent cohorts. Our proposed algorithm provides a novel framework for phenotyping children with suspected or confirmed infection for future biomarker studies.

biomarkers, children, clinical phenotypes, sepsis, serious bacterial infection
2296-2360
Nijman, Ruud G.
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Oostenbrink, Rianne
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Moll, Henriette A.
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Casals-Pascual, Climent
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von Both, Ulrich
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Cunnington, Aubrey
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De, Tisham
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Eleftheriou, Irini
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Emonts, Marieke
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Fink, Colin
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van der Flier, Michiel
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de Groot, Ronald
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Kaforou, Myrsini
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Kohlmaier, Benno
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Kuijpers, Taco W.
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Lim, Emma
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Maconochie, Ian K.
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Paulus, Stephane
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Martinon-Torres, Federico
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Pokorn, Marko
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Romaine, Sam T.
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Calle, Irene Rivero
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Schlapbach, Luregn J.
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Smit, Frank J.
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Tsolia, Maria
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Usuf, Effua
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Wright, Victoria J.
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Yeung, Shunmay
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Zavadska, Dace
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Zenz, Werner
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Levin, Michael
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Herberg, Jethro A.
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Carrol, Enitan D.
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The PERFORM consortium (Personalized Risk assessment in febrile children to optimize Real-life Management across the European Union)
Nijman, Ruud G.
a5acddd6-863b-4968-8099-2b15e802d604
Oostenbrink, Rianne
8ddd4c9f-a10c-4690-bec4-160238396a46
Moll, Henriette A.
9a62afe7-988b-4300-a94c-3b09317f5e71
Casals-Pascual, Climent
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von Both, Ulrich
fe20215e-06d4-4551-9263-662c26448bb4
Cunnington, Aubrey
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De, Tisham
f48d1601-eab5-4fbf-9011-e4437bedb738
Eleftheriou, Irini
41fff16f-2f9d-40bd-938e-e6d32c0b8e77
Emonts, Marieke
5a700b04-6f36-4fbe-bd2c-5d046704f018
Fink, Colin
273dee61-954c-465b-835e-a83f77b76165
van der Flier, Michiel
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de Groot, Ronald
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Kaforou, Myrsini
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Kohlmaier, Benno
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Kuijpers, Taco W.
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Lim, Emma
e78e48f2-5cb7-42e4-9619-044b7fd35444
Maconochie, Ian K.
61016f24-3f6f-49d6-b130-4a2e8335a9f1
Paulus, Stephane
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Martinon-Torres, Federico
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Pokorn, Marko
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Romaine, Sam T.
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Calle, Irene Rivero
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Schlapbach, Luregn J.
8f800b9e-0301-4722-8f02-d3d2fc3395af
Smit, Frank J.
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Tsolia, Maria
537d379f-d08e-4d9a-9ef1-0d4310b6eb28
Usuf, Effua
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Wright, Victoria J.
f55e8d8a-82ea-4487-a13f-a857792f9262
Yeung, Shunmay
1d7827ab-6638-469a-868f-550d46b67906
Zavadska, Dace
70425218-2a28-42c8-afe6-f16d91a61314
Zenz, Werner
be42c131-ad28-42f8-bc7e-ac3fbe14b5b3
Levin, Michael
2be78359-2a08-4885-a83c-4f7a6d1de986
Herberg, Jethro A.
70a01329-d08a-4ab3-8fa6-94c674dd8f20
Carrol, Enitan D.
f643dc8c-745c-4919-be79-971266c9d483

Nijman, Ruud G., Oostenbrink, Rianne, Moll, Henriette A., Casals-Pascual, Climent, von Both, Ulrich and Cunnington, Aubrey , The PERFORM consortium (Personalized Risk assessment in febrile children to optimize Real-life Management across the European Union) (2021) A novel framework for phenotyping children with suspected or confirmed infection for future biomarker studies. Frontiers in Pediatrics, 9, [688272]. (doi:10.3389/fped.2021.688272).

Record type: Article

Abstract

Background: The limited diagnostic accuracy of biomarkers in children at risk of a serious bacterial infection (SBI) might be due to the imperfect reference standard of SBI. We aimed to evaluate the diagnostic performance of a new classification algorithm for biomarker discovery in children at risk of SBI. Methods: We used data from five previously published, prospective observational biomarker discovery studies, which included patients aged 0– <16 years: the Alder Hey emergency department (n = 1,120), Alder Hey pediatric intensive care unit (n = 355), Erasmus emergency department (n = 1,993), Maasstad emergency department (n = 714) and St. Mary's hospital (n = 200) cohorts. Biomarkers including procalcitonin (PCT) (4 cohorts), neutrophil gelatinase-associated lipocalin-2 (NGAL) (3 cohorts) and resistin (2 cohorts) were compared for their ability to classify patients according to current standards (dichotomous classification of SBI vs. non-SBI), vs. a proposed PERFORM classification algorithm that assign patients to one of eleven categories. These categories were based on clinical phenotype, test outcomes and C-reactive protein level and accounted for the uncertainty of final diagnosis in many febrile children. The success of the biomarkers was measured by the Area under the receiver operating Curves (AUCs) when they were used individually or in combination. Results: Using the new PERFORM classification system, patients with clinically confident bacterial diagnosis (“definite bacterial” category) had significantly higher levels of PCT, NGAL and resistin compared with those with a clinically confident viral diagnosis (“definite viral” category). Patients with diagnostic uncertainty had biomarker concentrations that varied across the spectrum. AUCs were higher for classification of “definite bacterial” vs. “definite viral” following the PERFORM algorithm than using the “SBI” vs. “non-SBI” classification; summary AUC for PCT was 0.77 (95% CI 0.72–0.82) vs. 0.70 (95% CI 0.65–0.75); for NGAL this was 0.80 (95% CI 0.69–0.91) vs. 0.70 (95% CI 0.58–0.81); for resistin this was 0.68 (95% CI 0.61–0.75) vs. 0.64 (0.58–0.69) The three biomarkers combined had summary AUC of 0.83 (0.77–0.89) for “definite bacterial” vs. “definite viral” infections and 0.71 (0.67–0.74) for “SBI” vs. “non-SBI.” Conclusion: Biomarkers of bacterial infection were strongly associated with the diagnostic categories using the PERFORM classification system in five independent cohorts. Our proposed algorithm provides a novel framework for phenotyping children with suspected or confirmed infection for future biomarker studies.

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Accepted/In Press date: 28 June 2021
e-pub ahead of print date: 28 July 2021
Published date: 28 July 2021
Additional Information: Copyright © 2021 Nijman, Oostenbrink, Moll, Casals-Pascual, von Both, Cunnington, De, Eleftheriou, Emonts, Fink, van der Flier, de Groot, Kaforou, Kohlmaier, Kuijpers, Lim, Maconochie, Paulus, Martinon-Torres, Pokorn, Romaine, Calle, Schlapbach, Smit, Tsolia, Usuf, Wright, Yeung, Zavadska, Zenz, Levin, Herberg, Carrol and the PERFORM consortium (Personalized Risk assessment in febrile children to optimize Real-life Management across the European Union).
Keywords: biomarkers, children, clinical phenotypes, sepsis, serious bacterial infection

Identifiers

Local EPrints ID: 452340
URI: http://eprints.soton.ac.uk/id/eprint/452340
ISSN: 2296-2360
PURE UUID: 50c09fea-d9e0-4115-882d-65de53aaaba6

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Date deposited: 08 Dec 2021 18:44
Last modified: 17 Mar 2024 12:51

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Contributors

Author: Ruud G. Nijman
Author: Rianne Oostenbrink
Author: Henriette A. Moll
Author: Climent Casals-Pascual
Author: Ulrich von Both
Author: Aubrey Cunnington
Author: Tisham De
Author: Irini Eleftheriou
Author: Marieke Emonts
Author: Colin Fink
Author: Michiel van der Flier
Author: Ronald de Groot
Author: Myrsini Kaforou
Author: Benno Kohlmaier
Author: Taco W. Kuijpers
Author: Emma Lim
Author: Ian K. Maconochie
Author: Stephane Paulus
Author: Federico Martinon-Torres
Author: Marko Pokorn
Author: Sam T. Romaine
Author: Irene Rivero Calle
Author: Luregn J. Schlapbach
Author: Frank J. Smit
Author: Maria Tsolia
Author: Effua Usuf
Author: Victoria J. Wright
Author: Shunmay Yeung
Author: Dace Zavadska
Author: Werner Zenz
Author: Michael Levin
Author: Jethro A. Herberg
Author: Enitan D. Carrol
Corporate Author: The PERFORM consortium (Personalized Risk assessment in febrile children to optimize Real-life Management across the European Union)

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