The University of Southampton
University of Southampton Institutional Repository

Heteronuclear transfers from labile protons in biomolecular NMR: Cross polarization, revisited

Heteronuclear transfers from labile protons in biomolecular NMR: Cross polarization, revisited
Heteronuclear transfers from labile protons in biomolecular NMR: Cross polarization, revisited
INEPT- and HMQC-based pulse sequences are widely used to transfer polarization between heteronuclei, particularly in biomolecular spectroscopy: they are easy to setup and involve low power deposition. Still, these short-pulse polarization transfers schemes are challenged by fast solvent chemical exchange. An alternative to improve these heteronuclear transfers is J-driven cross polarization (J-CP), which transfers polarization by spin-locking the coupled spins under Hartmann-Hahn conditions. J-CP provides certain immunity against chemical exchange and other T2-like relaxation effects, a behavior that is here examined in depth by both Liouville-space numerical and analytical derivations describing the transfer efficiency. While superior to INEPT-based transfers, fast exchange may also slow down these J-CP transfers, hurting their efficiency. This study therefore explores the potential of repeated projective operations to improve 1H→15N and 1H→15N→13C J-CP transfers in the presence of fast solvent chemical exchanges. It is found that while repeating J-CP provides little 1H→15N transfer advantages over a prolonged CP, multiple contacts that keep both the water and the labile protons effectively spin-locked can improve 1H→15N→13C transfers in the presence of chemical exchange. The ensuing Looped, Concatenated Cross Polarization (L-CCP) compensates for single J-CP losses by relying on the 13C’s longer lifetimes, leading to a kind of “algorithmic cooling” that can provide high polarization for the 15N as well as carbonyl and alpha 13Cs. This can facilitate certain experiments, as demonstrated with triple resonance experiments on intrinsically disordered proteins involving labile, chemically exchanging protons.
Chemical exchange, INEPT transfer, J-driven cross polarization, Looped projective measurements
1090-7807
Novakovic, Mihajlo
cf0b003c-cad9-4088-a492-8d10a86a1a68
Jayanthi, Sundaresan
20962406-4c93-4df3-99f4-69a59d1dcbd6
Lupulescu, Adonis
479b3cd8-02a4-4680-8e3e-f2b7cb328030
Grazia Concilio, Maria
796c11cb-a0b9-42d9-a2e5-b8ad0e46bf51
Kim, Jihyun
ea5565a0-b510-4142-aa78-7ab48c89c14d
Columbus, David
c6f93404-f5bb-49bb-8787-6c262b36266f
Kuprov, Ilya
bb07f28a-5038-4524-8146-e3fc8344c065
Frydman, Lucio
4f00a1a4-d3a4-47fc-b9c9-50813cb39110
Novakovic, Mihajlo
cf0b003c-cad9-4088-a492-8d10a86a1a68
Jayanthi, Sundaresan
20962406-4c93-4df3-99f4-69a59d1dcbd6
Lupulescu, Adonis
479b3cd8-02a4-4680-8e3e-f2b7cb328030
Grazia Concilio, Maria
796c11cb-a0b9-42d9-a2e5-b8ad0e46bf51
Kim, Jihyun
ea5565a0-b510-4142-aa78-7ab48c89c14d
Columbus, David
c6f93404-f5bb-49bb-8787-6c262b36266f
Kuprov, Ilya
bb07f28a-5038-4524-8146-e3fc8344c065
Frydman, Lucio
4f00a1a4-d3a4-47fc-b9c9-50813cb39110

Novakovic, Mihajlo, Jayanthi, Sundaresan, Lupulescu, Adonis, Grazia Concilio, Maria, Kim, Jihyun, Columbus, David, Kuprov, Ilya and Frydman, Lucio (2021) Heteronuclear transfers from labile protons in biomolecular NMR: Cross polarization, revisited. Journal of Magnetic Resonance, 333, [107083]. (doi:10.1016/j.jmr.2021.107083).

Record type: Article

Abstract

INEPT- and HMQC-based pulse sequences are widely used to transfer polarization between heteronuclei, particularly in biomolecular spectroscopy: they are easy to setup and involve low power deposition. Still, these short-pulse polarization transfers schemes are challenged by fast solvent chemical exchange. An alternative to improve these heteronuclear transfers is J-driven cross polarization (J-CP), which transfers polarization by spin-locking the coupled spins under Hartmann-Hahn conditions. J-CP provides certain immunity against chemical exchange and other T2-like relaxation effects, a behavior that is here examined in depth by both Liouville-space numerical and analytical derivations describing the transfer efficiency. While superior to INEPT-based transfers, fast exchange may also slow down these J-CP transfers, hurting their efficiency. This study therefore explores the potential of repeated projective operations to improve 1H→15N and 1H→15N→13C J-CP transfers in the presence of fast solvent chemical exchanges. It is found that while repeating J-CP provides little 1H→15N transfer advantages over a prolonged CP, multiple contacts that keep both the water and the labile protons effectively spin-locked can improve 1H→15N→13C transfers in the presence of chemical exchange. The ensuing Looped, Concatenated Cross Polarization (L-CCP) compensates for single J-CP losses by relying on the 13C’s longer lifetimes, leading to a kind of “algorithmic cooling” that can provide high polarization for the 15N as well as carbonyl and alpha 13Cs. This can facilitate certain experiments, as demonstrated with triple resonance experiments on intrinsically disordered proteins involving labile, chemically exchanging protons.

Text
JMR-21-157_R1 - Accepted Manuscript
Download (2MB)

More information

Accepted/In Press date: 10 October 2021
Published date: December 2021
Keywords: Chemical exchange, INEPT transfer, J-driven cross polarization, Looped projective measurements

Identifiers

Local EPrints ID: 453066
URI: http://eprints.soton.ac.uk/id/eprint/453066
ISSN: 1090-7807
PURE UUID: cc3b2771-5096-42bf-ba6c-0ec03c66d531
ORCID for Ilya Kuprov: ORCID iD orcid.org/0000-0003-0430-2682

Catalogue record

Date deposited: 07 Jan 2022 17:51
Last modified: 17 Mar 2024 06:57

Export record

Altmetrics

Contributors

Author: Mihajlo Novakovic
Author: Sundaresan Jayanthi
Author: Adonis Lupulescu
Author: Maria Grazia Concilio
Author: Jihyun Kim
Author: David Columbus
Author: Ilya Kuprov ORCID iD
Author: Lucio Frydman

Download statistics

Downloads from ePrints over the past year. Other digital versions may also be available to download e.g. from the publisher's website.

View more statistics

Atom RSS 1.0 RSS 2.0

Contact ePrints Soton: eprints@soton.ac.uk

ePrints Soton supports OAI 2.0 with a base URL of http://eprints.soton.ac.uk/cgi/oai2

This repository has been built using EPrints software, developed at the University of Southampton, but available to everyone to use.

We use cookies to ensure that we give you the best experience on our website. If you continue without changing your settings, we will assume that you are happy to receive cookies on the University of Southampton website.

×