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Structural basis for broad anti-phage immunity by DISARM

Structural basis for broad anti-phage immunity by DISARM
Structural basis for broad anti-phage immunity by DISARM
In the evolutionary arms race against phage, bacteria have assembled a diverse arsenal of antiviral immune strategies. While the recently discovered DISARM (Defense Island System Associated with Restriction-Modification) systems can provide protection against a wide range of phage, the molecular mechanisms that underpin broad antiviral targeting but avoiding autoimmunity remain enigmatic. Here, we report cryo-EM structures of the core DISARM complex, DrmAB, both alone and in complex with an unmethylated phage DNA mimetic. These structures reveal that DrmAB core complex is autoinhibited by a trigger loop (TL) within DrmA and binding to DNA substrates containing a 5’ overhang dislodges the TL, initiating a long-range structural rearrangement for DrmAB activation. Together with structure-guided in vivo studies, our work provides insights into the mechanism of phage DNA recognition and specific activation of this widespread antiviral defense system.
2041-1723
Bravo, Jack P.K.
b59c3de9-a7ac-4e03-a6b8-7d8bd4763696
Aparicio-Maldonado, Cristian
336d135a-3e11-4e25-a26f-34965940aee2
Luzia De Nobrega, Franklin
6532795d-88a4-4f05-9b26-6af5b8f21a0d
Brouns, Stan J.J.
b9c93a6a-120b-476b-8394-048e41d8ae79
Taylor, David W.
c22699d2-1147-45ad-84fd-57a1cf0369cc
Bravo, Jack P.K.
b59c3de9-a7ac-4e03-a6b8-7d8bd4763696
Aparicio-Maldonado, Cristian
336d135a-3e11-4e25-a26f-34965940aee2
Luzia De Nobrega, Franklin
6532795d-88a4-4f05-9b26-6af5b8f21a0d
Brouns, Stan J.J.
b9c93a6a-120b-476b-8394-048e41d8ae79
Taylor, David W.
c22699d2-1147-45ad-84fd-57a1cf0369cc

Bravo, Jack P.K., Aparicio-Maldonado, Cristian, Luzia De Nobrega, Franklin, Brouns, Stan J.J. and Taylor, David W. (2022) Structural basis for broad anti-phage immunity by DISARM. Nature Communications, 13, [2987]. (doi:10.1101/2021.12.26.474123).

Record type: Article

Abstract

In the evolutionary arms race against phage, bacteria have assembled a diverse arsenal of antiviral immune strategies. While the recently discovered DISARM (Defense Island System Associated with Restriction-Modification) systems can provide protection against a wide range of phage, the molecular mechanisms that underpin broad antiviral targeting but avoiding autoimmunity remain enigmatic. Here, we report cryo-EM structures of the core DISARM complex, DrmAB, both alone and in complex with an unmethylated phage DNA mimetic. These structures reveal that DrmAB core complex is autoinhibited by a trigger loop (TL) within DrmA and binding to DNA substrates containing a 5’ overhang dislodges the TL, initiating a long-range structural rearrangement for DrmAB activation. Together with structure-guided in vivo studies, our work provides insights into the mechanism of phage DNA recognition and specific activation of this widespread antiviral defense system.

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2021.12.26.474123v1.full - Author's Original
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In preparation date: 26 December 2021
e-pub ahead of print date: 27 May 2022

Identifiers

Local EPrints ID: 456379
URI: http://eprints.soton.ac.uk/id/eprint/456379
ISSN: 2041-1723
PURE UUID: 7e0a0df9-f6e5-4e07-9331-601c4e2d9215
ORCID for Franklin Luzia De Nobrega: ORCID iD orcid.org/0000-0002-8238-1083

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Date deposited: 27 Apr 2022 15:23
Last modified: 17 Mar 2024 04:02

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Contributors

Author: Jack P.K. Bravo
Author: Cristian Aparicio-Maldonado
Author: Stan J.J. Brouns
Author: David W. Taylor

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