The University of Southampton
University of Southampton Institutional Repository

GA4GH: International policies and standards for data sharing across genomic research and healthcare

GA4GH: International policies and standards for data sharing across genomic research and healthcare
GA4GH: International policies and standards for data sharing across genomic research and healthcare
The Global Alliance for Genomics and Health (GA4GH) aims to accelerate biomedical advances by enabling the responsible sharing of clinical and genomic data through both harmonized data aggregation and federated approaches. The decreasing cost of genomic sequencing (along with other genome-wide molecular assays) and increasing evidence of its clinical utility will soon drive the generation of sequence data from tens of millions of humans, with increasing levels of diversity. In this perspective, we present the GA4GH strategies for addressing the major challenges of this data revolution. We describe the GA4GH organization, which is fueled by the development efforts of eight Work Streams and informed by the needs of 24 Driver Projects and other key stakeholders. We present the GA4GH suite of secure, interoperable technical standards and policy frameworks and review the current status of standards, their relevance to key domains of research and clinical care, and future plans of GA4GH. Broad international participation in building, adopting, and deploying GA4GH standards and frameworks will catalyze an unprecedented effort in data sharing that will be critical to advancing genomic medicine and ensuring that all populations can access its benefits.
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Rehm, Heidi L
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Page, Angela J H
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Smith, Lindsay
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Chakravarty, Debyani
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Flicek, Paul
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Fore, Ian M
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Molnár-Gábor, Fruzsina
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Mulder, Nicola
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Munoz-Torres, Monica C
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Nag, Rishi
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Nakagawa, Hidewaki
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Zhang, Junjun
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Goodhand, Peter
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North, Kathryn
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Birney, Ewan
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Rehm, Heidi L, Page, Angela J H, Smith, Lindsay, Adams, Jeremy B, Alterovitz, Gil, Babb, Lawrence J, Barkley, Maxmillian P, Baudis, Michael, Beauvais, Michael J S, Beck, Tim, Beckmann, Jacques S, Beltran, Sergi, Bernick, David, Bernier, Alexander, Bonfield, James K, Boughtwood, Tiffany F, Bourque, Guillaume, Bowers, Sarion R, Brookes, Anthony J, Brudno, Michael, Brush, Matthew H, Bujold, David, Burdett, Tony, Buske, Orion J, Cabili, Moran N, Cameron, Daniel L, Carroll, Robert J, Casas-Silva, Esmeralda, Chakravarty, Debyani, Chaudhari, Bimal P, Chen, Shu Hui, Cherry, J Michael, Chung, Justina, Cline, Melissa, Clissold, Hayley L, Cook-Deegan, Robert M, Courtot, Mélanie, Cunningham, Fiona, Cupak, Miro, Davies, Robert M, Denisko, Danielle, Doerr, Megan J, Dolman, Lena I, Dove, Edward S, Dursi, L Jonathan, Dyke, Stephanie O M, Eddy, James A, Eilbeck, Karen, Ellrott, Kyle P, Fairley, Susan, Fakhro, Khalid A, Firth, Helen V, Fitzsimons, Michael S, Fiume, Marc, Flicek, Paul, Fore, Ian M, Freeberg, Mallory A, Freimuth, Robert R, Fromont, Lauren A, Fuerth, Jonathan, Gaff, Clara L, Gan, Weiniu, Ghanaim, Elena M, Glazer, David, Green, Robert C, Griffith, Malachi, Griffith, Obi L, Grossman, Robert L, Groza, Tudor, Auvil, Jaime M Guidry, Guigó, Roderic, Gupta, Dipayan, Haendel, Melissa A, Hamosh, Ada, Hansen, David P, Hart, Reece K, Hartley, Dean Mitchell, Haussler, David, Hendricks-Sturrup, Rachele M, Ho, Calvin W L, Hobb, Ashley E, Hoffman, Michael M, Hofmann, Oliver M, Holub, Petr, Hsu, Jacob Shujui, Hubaux, Jean-Pierre, Hunt, Sarah E, Husami, Ammar, Jacobsen, Julius O, Jamuar, Saumya S, Janes, Elizabeth L, Jeanson, Francis, Jené, Aina, Johns, Amber L, Joly, Yann, Jones, Steven J M, Kanitz, Alexander, Kato, Kazuto, Keane, Thomas M, Kekesi-Lafrance, Kristina, Kelleher, Jerome, Kerry, Giselle, Khor, Seik-Soon, Knoppers, Bartha M, Konopko, Melissa A, Kosaki, Kenjiro, Kuba, Martin, Lawson, Jonathan, Leinonen, Rasko, Li, Stephanie, Lin, Michael F, Linden, Mikael, Liu, Xianglin, Udara Liyanage, Isuru, Lopez, Javier, Lucassen, Anneke M, Lukowski, Michael, Mann, Alice L, Marshall, John, Mattioni, Michele, Metke-Jimenez, Alejandro, Middleton, Anna, Milne, Richard J, Molnár-Gábor, Fruzsina, Mulder, Nicola, Munoz-Torres, Monica C, Nag, Rishi, Nakagawa, Hidewaki, Nasir, Jamal, Navarro, Arcadi, Nelson, Tristan H, Niewielska, Ania, Nisselle, Amy, Niu, Jeffrey, Nyrönen, Tommi H, O'Connor, Brian D, Oesterle, Sabine, Ogishima, Soichi, Wang, Vivian Ota, Paglione, Laura A D, Palumbo, Emilio, Parkinson, Helen E, Philippakis, Anthony A, Pizarro, Angel D, Prlic, Andreas, Rambla, Jordi, Rendon, Augusto, Rider, Renee A, Robinson, Peter N, Rodarmer, Kurt W, Rodriguez, Laura Lyman, Rubin, Alan F, Rueda, Manuel, Rushton, Gregory A, Ryan, Rosalyn S, Saunders, Gary I, Schuilenburg, Helen, Schwede, Torsten, Scollen, Serena, Senf, Alexander, Sheffield, Nathan C, Skantharajah, Neerjah, Smith, Albert V, Sofia, Heidi J, Spalding, Dylan, Spurdle, Amanda B, Stark, Zornitza, Stein, Lincoln D, Suematsu, Makoto, Tan, Patrick, Tedds, Jonathan A, Thomson, Alastair A, Thorogood, Adrian, Tickle, Timothy L, Tokunaga, Katsushi, Törnroos, Juha, Torrents, David, Upchurch, Sean, Valencia, Alfonso, Guimera, Roman Valls, Vamathevan, Jessica, Varma, Susheel, Vears, Danya F, Viner, Coby, Voisin, Craig, Wagner, Alex H, Wallace, Susan E, Walsh, Brian P, Williams, Marc S, Winkler, Eva C, Wold, Barbara J, Wood, Grant M, Woolley, J Patrick, Yamasaki, Chisato, Yates, Andrew D, Yung, Christina K, Zass, Lyndon J, Zaytseva, Ksenia, Zhang, Junjun, Goodhand, Peter, North, Kathryn and Birney, Ewan (2021) GA4GH: International policies and standards for data sharing across genomic research and healthcare. Cell genomics, 1 (2), 1 - 33, [100029]. (doi:10.1016/j.xgen.2021.100029).

Record type: Article

Abstract

The Global Alliance for Genomics and Health (GA4GH) aims to accelerate biomedical advances by enabling the responsible sharing of clinical and genomic data through both harmonized data aggregation and federated approaches. The decreasing cost of genomic sequencing (along with other genome-wide molecular assays) and increasing evidence of its clinical utility will soon drive the generation of sequence data from tens of millions of humans, with increasing levels of diversity. In this perspective, we present the GA4GH strategies for addressing the major challenges of this data revolution. We describe the GA4GH organization, which is fueled by the development efforts of eight Work Streams and informed by the needs of 24 Driver Projects and other key stakeholders. We present the GA4GH suite of secure, interoperable technical standards and policy frameworks and review the current status of standards, their relevance to key domains of research and clinical care, and future plans of GA4GH. Broad international participation in building, adopting, and deploying GA4GH standards and frameworks will catalyze an unprecedented effort in data sharing that will be critical to advancing genomic medicine and ensuring that all populations can access its benefits.

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e-pub ahead of print date: 10 November 2021

Identifiers

Local EPrints ID: 458184
URI: http://eprints.soton.ac.uk/id/eprint/458184
ISSN: 2666-979X
PURE UUID: b44e3ec6-fab0-47ea-bb5e-02a1f66b6768
ORCID for Anneke M Lucassen: ORCID iD orcid.org/0000-0003-3324-4338
ORCID for John Marshall: ORCID iD orcid.org/0000-0002-9242-3646

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Date deposited: 30 Jun 2022 16:40
Last modified: 17 Mar 2024 02:54

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Contributors

Author: Heidi L Rehm
Author: Angela J H Page
Author: Lindsay Smith
Author: Jeremy B Adams
Author: Gil Alterovitz
Author: Lawrence J Babb
Author: Maxmillian P Barkley
Author: Michael Baudis
Author: Michael J S Beauvais
Author: Tim Beck
Author: Jacques S Beckmann
Author: Sergi Beltran
Author: David Bernick
Author: Alexander Bernier
Author: James K Bonfield
Author: Tiffany F Boughtwood
Author: Guillaume Bourque
Author: Sarion R Bowers
Author: Anthony J Brookes
Author: Michael Brudno
Author: Matthew H Brush
Author: David Bujold
Author: Tony Burdett
Author: Orion J Buske
Author: Moran N Cabili
Author: Daniel L Cameron
Author: Robert J Carroll
Author: Esmeralda Casas-Silva
Author: Debyani Chakravarty
Author: Bimal P Chaudhari
Author: Shu Hui Chen
Author: J Michael Cherry
Author: Justina Chung
Author: Melissa Cline
Author: Hayley L Clissold
Author: Robert M Cook-Deegan
Author: Mélanie Courtot
Author: Fiona Cunningham
Author: Miro Cupak
Author: Robert M Davies
Author: Danielle Denisko
Author: Megan J Doerr
Author: Lena I Dolman
Author: Edward S Dove
Author: L Jonathan Dursi
Author: Stephanie O M Dyke
Author: James A Eddy
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