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Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs.

Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs.
Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs.
The presence of relict non-photosynthetic plastids in obligate intracellular apicomplexan parasites (e.g. Plasmodium) has proved puzzling in many ways, but the recent discovery of their photosynthetic relative, Chromera velia, has begun to shed much-needed light on the origin and evolution of these plastids 1, 2. The intense interest that this single species has generated demonstrates how surprisingly little we know about photosynthetic relatives of apicomplexans as a whole. Here, we investigate global plastid diversity and distribution by comprehensively searching existing prokaryotic sequence surveys for eukaryotic plastids. From more than 1.6 million bacterial sequences, we identified 9,799 plastid-derived sequences, most of which were previously mis-labeled as ‘novel bacteria’ sequences. 98.8% of these plastid-derived sequences could be assigned to well-defined algal lineages, most often green algae, diatoms, and haptophytes. The exceptions were 121 sequences, all of which were related to apicomplexan parasites, and nearly all of which were derived from coral reef environments. Close relatives of C. velia were rare, but two other clusters were more common and globally distributed, one of which was tightly associated with corals. Overall, all of the major new lineages of algae we discovered were related to apicomplexans, suggesting that apicomplexans represent a large pool of unexplored algal diversity.
0960-9822
518-519
Janouškovec, J
fbaa4a5d-872e-465b-b2c3-bb35df455cc6
Horák, A
19e25b00-8d93-43c7-970d-090db26262a0
Barott, KL
a724e3ec-1086-4c75-b448-ea62bcd4d11a
Rohwer, FL
4b9c98f5-83f0-4aa4-aa0c-8bd0780bc17c
Keeling, PJ
fd51c2ef-1daa-442d-b186-71001aa7ca7d
Janouškovec, J
fbaa4a5d-872e-465b-b2c3-bb35df455cc6
Horák, A
19e25b00-8d93-43c7-970d-090db26262a0
Barott, KL
a724e3ec-1086-4c75-b448-ea62bcd4d11a
Rohwer, FL
4b9c98f5-83f0-4aa4-aa0c-8bd0780bc17c
Keeling, PJ
fd51c2ef-1daa-442d-b186-71001aa7ca7d

Janouškovec, J, Horák, A, Barott, KL, Rohwer, FL and Keeling, PJ (2012) Global analysis of plastid diversity reveals apicomplexan-related lineages in coral reefs. Current Biology, 22 (13), 518-519. (doi:10.1016/j.cub.2012.04.047).

Record type: Article

Abstract

The presence of relict non-photosynthetic plastids in obligate intracellular apicomplexan parasites (e.g. Plasmodium) has proved puzzling in many ways, but the recent discovery of their photosynthetic relative, Chromera velia, has begun to shed much-needed light on the origin and evolution of these plastids 1, 2. The intense interest that this single species has generated demonstrates how surprisingly little we know about photosynthetic relatives of apicomplexans as a whole. Here, we investigate global plastid diversity and distribution by comprehensively searching existing prokaryotic sequence surveys for eukaryotic plastids. From more than 1.6 million bacterial sequences, we identified 9,799 plastid-derived sequences, most of which were previously mis-labeled as ‘novel bacteria’ sequences. 98.8% of these plastid-derived sequences could be assigned to well-defined algal lineages, most often green algae, diatoms, and haptophytes. The exceptions were 121 sequences, all of which were related to apicomplexan parasites, and nearly all of which were derived from coral reef environments. Close relatives of C. velia were rare, but two other clusters were more common and globally distributed, one of which was tightly associated with corals. Overall, all of the major new lineages of algae we discovered were related to apicomplexans, suggesting that apicomplexans represent a large pool of unexplored algal diversity.

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More information

e-pub ahead of print date: 9 July 2012
Published date: 10 July 2012

Identifiers

Local EPrints ID: 467559
URI: http://eprints.soton.ac.uk/id/eprint/467559
ISSN: 0960-9822
PURE UUID: f1518488-24ac-427c-8a4b-9bccae159b51
ORCID for J Janouškovec: ORCID iD orcid.org/0000-0001-6547-749X

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Date deposited: 13 Jul 2022 17:11
Last modified: 17 Mar 2024 04:11

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Author: J Janouškovec ORCID iD
Author: A Horák
Author: KL Barott
Author: FL Rohwer
Author: PJ Keeling

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