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Novel DNM1L variants impair mitochondrial dynamics through divergent mechanisms

Novel DNM1L variants impair mitochondrial dynamics through divergent mechanisms
Novel DNM1L variants impair mitochondrial dynamics through divergent mechanisms
Imbalances in mitochondrial and peroxisomal dynamics are associated with a spectrum of human neurological disorders. Mitochondrial and peroxisomal fission both involve dynamin-related protein 1 (DRP1) oligomerisation and membrane constriction, although the precise biophysical mechanisms by which distinct DRP1 variants affect the assembly and activity of different DRP1 domains remains largely unexplored. We analysed four unreported de novo heterozygous variants in the dynamin-1-like gene DNM1L, affecting different highly conserved DRP1 domains, leading to developmental delay, seizures, hypotonia, and/or rare cardiac complications in infancy. Single-nucleotide DRP1 stalk domain variants were found to correlate with more severe clinical phenotypes, with in vitro recombinant human DRP1 mutants demonstrating greater impairments in protein oligomerisation, DRP1-peroxisomal recruitment, and both mitochondrial and peroxisomal hyperfusion compared to GTPase or GTPase-effector domain variants. Importantly, we identified a novel mechanism of pathogenesis, where a p.Arg710Gly variant uncouples DRP1 assembly from assembly-stimulated GTP hydrolysis, providing mechanistic insight into how assembly-state information is transmitted to the GTPase domain. Together, these data reveal that discrete, pathological DNM1L variants impair mitochondrial network maintenance by divergent mechanisms.
Nolden, Kelsey A.
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Egner, John M.
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Collier, Jack J.
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Russell, Oliver M.
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Alston, Charlotte L.
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Harwig, Megan C.
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Widlansky, Michael E.
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Sasorith, Souphatta
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Barbosa, Ines A.
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Douglas, Andrew
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Baptista, Julia
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Walker, Mark
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Donnelly, Deirdre E
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Morris, Andrew A.
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Tan, Hui Jeen
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Kurian, Manju A.
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Gorman, Kathleen
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Mordekar, Santosh
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Deshpande, Charu
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Samanta, Rajib
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McFarland, Robert
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Hill, R. Blake
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Taylor, Robert W.
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Olahova, Monika
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Nolden, Kelsey A.
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Egner, John M.
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Collier, Jack J.
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Russell, Oliver M.
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Alston, Charlotte L.
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Harwig, Megan C.
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Widlansky, Michael E.
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Sasorith, Souphatta
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Barbosa, Ines A.
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Douglas, Andrew
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Baptista, Julia
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Walker, Mark
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Donnelly, Deirdre E
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Morris, Andrew A.
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Tan, Hui Jeen
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Kurian, Manju A.
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Gorman, Kathleen
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Mordekar, Santosh
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Deshpande, Charu
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Samanta, Rajib
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McFarland, Robert
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Hill, R. Blake
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Taylor, Robert W.
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Olahova, Monika
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Nolden, Kelsey A., Egner, John M., Collier, Jack J., Russell, Oliver M., Alston, Charlotte L., Harwig, Megan C., Widlansky, Michael E., Sasorith, Souphatta, Barbosa, Ines A., Douglas, Andrew, Baptista, Julia, Walker, Mark, Donnelly, Deirdre E, Morris, Andrew A., Tan, Hui Jeen, Kurian, Manju A., Gorman, Kathleen, Mordekar, Santosh, Deshpande, Charu, Samanta, Rajib, McFarland, Robert, Hill, R. Blake, Taylor, Robert W. and Olahova, Monika (2022) Novel DNM1L variants impair mitochondrial dynamics through divergent mechanisms. Life Science Alliance, 5 (12), [e202101284]. (doi:10.26508/lsa.202101284).

Record type: Article

Abstract

Imbalances in mitochondrial and peroxisomal dynamics are associated with a spectrum of human neurological disorders. Mitochondrial and peroxisomal fission both involve dynamin-related protein 1 (DRP1) oligomerisation and membrane constriction, although the precise biophysical mechanisms by which distinct DRP1 variants affect the assembly and activity of different DRP1 domains remains largely unexplored. We analysed four unreported de novo heterozygous variants in the dynamin-1-like gene DNM1L, affecting different highly conserved DRP1 domains, leading to developmental delay, seizures, hypotonia, and/or rare cardiac complications in infancy. Single-nucleotide DRP1 stalk domain variants were found to correlate with more severe clinical phenotypes, with in vitro recombinant human DRP1 mutants demonstrating greater impairments in protein oligomerisation, DRP1-peroxisomal recruitment, and both mitochondrial and peroxisomal hyperfusion compared to GTPase or GTPase-effector domain variants. Importantly, we identified a novel mechanism of pathogenesis, where a p.Arg710Gly variant uncouples DRP1 assembly from assembly-stimulated GTP hydrolysis, providing mechanistic insight into how assembly-state information is transmitted to the GTPase domain. Together, these data reveal that discrete, pathological DNM1L variants impair mitochondrial network maintenance by divergent mechanisms.

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Nolden, Egner et al. 2022 - Accepted Manuscript
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Accepted/In Press date: 7 July 2022
Published date: December 2022
Additional Information: Funding Information: R McFarland and RW Taylor are supported by the Wellcome Centre for Mitochondrial Research (203105/Z/16/Z), Mitochondrial Disease Patient Cohort (UK) (G0800674), the Medical Research Council (MRC) International Centre for Genomic Medicine in Neuromuscular Disease (MR/S005021/1), the UK NIHR Biomedical Research Centre for Ageing and Age-related disease award to the Newcastle upon Tyne Foundation Hospitals NHS Trust, and the UK NHS Highly Specialised Service for Rare Mitochondrial Disorders of Adults and Children. M Oláhová and RW Taylor receive funding from the Pathology Society. R McFarland, M Oláhová, and RW Taylor receive funding from the Lily Foundation. OM Russell is supported by the Wellcome Centre for Mitochondrial Research (203105/Z/16/Z). CL Alston is supported by a National Institute for Health Research (NIHR) Post-Doctoral Fellowship (PDF-2018-11-ST2-021). This project was also supported by the following National Institutes of Health grants: TL1TR001437 and T32GM080202 (to KA Nolden), R01GM067180 (to RB Hill), and R01HL128240 (to ME Widlansky). The views expressed in this publication are those of the author(s) and not necessarily those of the National Health Service (NHS), the National Institute for Health Research (NIHR) or the Department of Health and Social Care. The content is solely the responsibility of the author(s) and does not necessarily represent the official views of the NIH. We would like to thank Dr. Julien Prudent from the MRC Mitochondrial Biology Unit at University of Cambridge for constructive discussions about the project. We also thank Laura Bone for technical support and the Newcastle University Bioimaging Unit for assistance with the microscopy. We thank the Exeter Genomics Laboratory and the Gastroenterology team at Sheffield Children’s Hospital for their support. Publisher Copyright: © 2022 Nolden et al.

Identifiers

Local EPrints ID: 468355
URI: http://eprints.soton.ac.uk/id/eprint/468355
PURE UUID: 4928aaea-41b4-490b-9845-5f06969b1292
ORCID for Andrew Douglas: ORCID iD orcid.org/0000-0001-5154-6714

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Date deposited: 11 Aug 2022 16:30
Last modified: 17 Mar 2024 03:21

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Contributors

Author: Kelsey A. Nolden
Author: John M. Egner
Author: Jack J. Collier
Author: Oliver M. Russell
Author: Charlotte L. Alston
Author: Megan C. Harwig
Author: Michael E. Widlansky
Author: Souphatta Sasorith
Author: Ines A. Barbosa
Author: Andrew Douglas ORCID iD
Author: Julia Baptista
Author: Mark Walker
Author: Deirdre E Donnelly
Author: Andrew A. Morris
Author: Hui Jeen Tan
Author: Manju A. Kurian
Author: Kathleen Gorman
Author: Santosh Mordekar
Author: Charu Deshpande
Author: Rajib Samanta
Author: Robert McFarland
Author: R. Blake Hill
Author: Robert W. Taylor
Author: Monika Olahova

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