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Short-term diet intervention alters the small non-coding RNA (sncRNA) landscape of human sperm

Short-term diet intervention alters the small non-coding RNA (sncRNA) landscape of human sperm
Short-term diet intervention alters the small non-coding RNA (sncRNA) landscape of human sperm
Offspring health outcomes are often linked with epigenetic alterations triggered by maternal nutrition and intrauterine environment. Strong experimental data also link paternal preconception nutrition with pathophysiology in the offspring, but the mechanism(s) routing the effects of paternal exposures remain elusive. Animal experimental models have highlighted small non-coding RNAs (sncRNAs) as potential regulators of paternal effects, though less is known about the existence of similar mechanisms in human sperm. Here, we first characterised the baseline sncRNA landscape of human sperm, and then studied the effects of a 6-week diet intervention on their expression profile. Baseline profiling identified 5’tRFs, miRNAs and piRNAs to be the most abundant sncRNA subtypes, primarily expressed from regulatory elements like UTRs, CpG-rich regions and promoters. Expression of a subset of these sncRNAs varied with age, BMI and sperm quality of the donor. Diet intervention enriched in vitamin D and omega-3 fatty acids showed a marked increase of these nutrients in circulation and altered the sperm sncRNA expression. These included 3 tRFs, 15 miRNAs and 112 piRNAs, with gene targets involved in fatty acid metabolism, vitamin D response (LXR/RXR activation, TGF-beta and Wnt signaling), and transposable elements. These findings provide evidence that human sperms are sensitive to alterations in exposures such as diet, and sncRNAs capture the epigenetic imprint of this change. Hence changes to paternal nutrition during preconception may improve sperm quality and offspring health outcomes. To benefit future research, we developed iDad_DB, an open access database of baseline and diet-altered sncRNA in human male germline.
bioRxiv
Vaz, C
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Kermack, AJ
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Burton, M
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Tan, PF
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Huan, J
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Yoo, TPX
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Donnelly, Kerry
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Wellstead, SJ
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Fisk, HL
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Houghton, FD
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Lewis, S
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Chong, YS
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Gluckman, PD
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Cheong, Y
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Karnani, N
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Vaz, C
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Kermack, AJ
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Burton, M
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Tan, PF
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Huan, J
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Yoo, TPX
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Donnelly, Kerry
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Wellstead, SJ
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Fisk, HL
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Houghton, FD
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Lewis, S
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Chong, YS
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Gluckman, PD
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Cheong, Y
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Karnani, N
1f3bc109-4c37-4af3-9db9-ad09310e757b

[Unknown type: UNSPECIFIED]

Record type: UNSPECIFIED

Abstract

Offspring health outcomes are often linked with epigenetic alterations triggered by maternal nutrition and intrauterine environment. Strong experimental data also link paternal preconception nutrition with pathophysiology in the offspring, but the mechanism(s) routing the effects of paternal exposures remain elusive. Animal experimental models have highlighted small non-coding RNAs (sncRNAs) as potential regulators of paternal effects, though less is known about the existence of similar mechanisms in human sperm. Here, we first characterised the baseline sncRNA landscape of human sperm, and then studied the effects of a 6-week diet intervention on their expression profile. Baseline profiling identified 5’tRFs, miRNAs and piRNAs to be the most abundant sncRNA subtypes, primarily expressed from regulatory elements like UTRs, CpG-rich regions and promoters. Expression of a subset of these sncRNAs varied with age, BMI and sperm quality of the donor. Diet intervention enriched in vitamin D and omega-3 fatty acids showed a marked increase of these nutrients in circulation and altered the sperm sncRNA expression. These included 3 tRFs, 15 miRNAs and 112 piRNAs, with gene targets involved in fatty acid metabolism, vitamin D response (LXR/RXR activation, TGF-beta and Wnt signaling), and transposable elements. These findings provide evidence that human sperms are sensitive to alterations in exposures such as diet, and sncRNAs capture the epigenetic imprint of this change. Hence changes to paternal nutrition during preconception may improve sperm quality and offspring health outcomes. To benefit future research, we developed iDad_DB, an open access database of baseline and diet-altered sncRNA in human male germline.

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More information

e-pub ahead of print date: 9 July 2021
Additional Information: One of the authors doesn't think this was actually ever published so I'm not sure what do do about this.

Identifiers

Local EPrints ID: 468780
URI: http://eprints.soton.ac.uk/id/eprint/468780
PURE UUID: d39354dd-ce7d-4841-ad74-b299bbd4e321
ORCID for AJ Kermack: ORCID iD orcid.org/0000-0002-9176-9426
ORCID for M Burton: ORCID iD orcid.org/0000-0002-7117-8151
ORCID for HL Fisk: ORCID iD orcid.org/0000-0002-9534-3246
ORCID for FD Houghton: ORCID iD orcid.org/0000-0002-5167-1694
ORCID for Y Cheong: ORCID iD orcid.org/0000-0001-7687-4597

Catalogue record

Date deposited: 25 Aug 2022 17:14
Last modified: 09 Jul 2024 01:53

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Contributors

Author: C Vaz
Author: AJ Kermack ORCID iD
Author: M Burton ORCID iD
Author: PF Tan
Author: J Huan
Author: TPX Yoo
Author: Kerry Donnelly
Author: SJ Wellstead
Author: HL Fisk ORCID iD
Author: FD Houghton ORCID iD
Author: S Lewis
Author: YS Chong
Author: PD Gluckman
Author: Y Cheong ORCID iD
Author: N Karnani

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