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Data-driven interpolation for super-scarce X-ray computed tomography

Data-driven interpolation for super-scarce X-ray computed tomography
Data-driven interpolation for super-scarce X-ray computed tomography
We address the problem of reconstructing X-Ray tomographic images from scarce measurements by interpolating missing acquisitions using a self-supervised approach. To do so, we train shallow neural networks to combine two neighbouring acquisitions into an estimated measurement at an intermediate angle. This procedure yields an enhanced sequence of measurements that can be reconstructed using standard methods, or further enhanced using regularisation approaches. Unlike methods that improve the sequence of acquisitions using an initial deterministic interpolation followed by machine-learning enhancement, we focus on inferring one measurement at once. This allows the method to scale to 3D, the computation to be faster and crucially, the interpolation to be significantly better than the current methods, when they exist. We also establish that a sequence of measurements must be processed as such, rather than as an image or a volume. We do so by comparing interpolation and up-sampling methods, and find that the latter significantly under-perform. We compare the performance of the proposed method against deterministic interpolation and up-sampling procedures and find that it outperforms them, even when used jointly with a state-of-the-art projection-data enhancement approach using machine-learning. These results are obtained for 2D and 3D imaging, on large biomedical datasets, in both projection space and image space.
eess.IV, cs.CV, cs.LG, physics.med-ph
Valat, Emilien
8c6f8b31-e1b7-449d-a5a0-ce7ce7e472b4
Farrahi, Katayoun
bc848b9c-fc32-475c-b241-f6ade8babacb
Blumensath, Thomas
470d9055-0373-457e-bf80-4389f8ec4ead
Valat, Emilien
8c6f8b31-e1b7-449d-a5a0-ce7ce7e472b4
Farrahi, Katayoun
bc848b9c-fc32-475c-b241-f6ade8babacb
Blumensath, Thomas
470d9055-0373-457e-bf80-4389f8ec4ead

Valat, Emilien, Farrahi, Katayoun and Blumensath, Thomas (2022) Data-driven interpolation for super-scarce X-ray computed tomography 11pp. (doi:10.48550/arXiv.2205.07888).

Record type: Monograph (Working Paper)

Abstract

We address the problem of reconstructing X-Ray tomographic images from scarce measurements by interpolating missing acquisitions using a self-supervised approach. To do so, we train shallow neural networks to combine two neighbouring acquisitions into an estimated measurement at an intermediate angle. This procedure yields an enhanced sequence of measurements that can be reconstructed using standard methods, or further enhanced using regularisation approaches. Unlike methods that improve the sequence of acquisitions using an initial deterministic interpolation followed by machine-learning enhancement, we focus on inferring one measurement at once. This allows the method to scale to 3D, the computation to be faster and crucially, the interpolation to be significantly better than the current methods, when they exist. We also establish that a sequence of measurements must be processed as such, rather than as an image or a volume. We do so by comparing interpolation and up-sampling methods, and find that the latter significantly under-perform. We compare the performance of the proposed method against deterministic interpolation and up-sampling procedures and find that it outperforms them, even when used jointly with a state-of-the-art projection-data enhancement approach using machine-learning. These results are obtained for 2D and 3D imaging, on large biomedical datasets, in both projection space and image space.

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2205.07888v1 - Author's Original
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Published date: 16 May 2022
Keywords: eess.IV, cs.CV, cs.LG, physics.med-ph

Identifiers

Local EPrints ID: 469135
URI: http://eprints.soton.ac.uk/id/eprint/469135
PURE UUID: 6d5813b2-0751-483f-a65c-6aaf3812df5f
ORCID for Emilien Valat: ORCID iD orcid.org/0000-0002-1825-0097
ORCID for Katayoun Farrahi: ORCID iD orcid.org/0000-0001-6775-127X
ORCID for Thomas Blumensath: ORCID iD orcid.org/0000-0002-7489-265X

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Date deposited: 07 Sep 2022 17:12
Last modified: 17 Mar 2024 03:47

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Contributors

Author: Emilien Valat ORCID iD
Author: Katayoun Farrahi ORCID iD

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