The University of Southampton
University of Southampton Institutional Repository

Linkage of asthma to markers on chromosome 12 in a sample of 240 families using quantitative phenotype scores

Linkage of asthma to markers on chromosome 12 in a sample of 240 families using quantitative phenotype scores
Linkage of asthma to markers on chromosome 12 in a sample of 240 families using quantitative phenotype scores

We present evidence of linkage between markers on chromosome 12 and asthma using the BETA program for nonparametric single- and multipoint linkage analysis. We have used quantitative scores as our phenotypic variables, combining data into indices for asthma and atopy and maximizing heritability. The largest single-locus LODs were achieved for asthma: D12S342 and asthma score (LOD 2.255), D12S324 and asthma affection (LOD 2.214), and D12S366 and wheeze (LOD 3.307). The region of interest identified using multipoint analysis, with a maximum LOD of 2.29, centers around D12S97 at location 173.5 cM with a standard error of 6.5 for the asthma score and close agreement for asthma affection and wheeze. Such evidence merits further investigation of this area in an attempt to define the region with greater precision with a view to identifying candidate genes. We hope that the methods presented will encourage researchers to use phenotypic information in a way that encourages meta-analysis.

0888-7543
251-259
Wilkinson, Jane
2eab5733-e987-4e00-95af-b15801d303e2
Grimley, Sarah
d152bab8-a7e0-4b46-b321-e714c2786f02
Collins, Andrew
7daa83eb-0b21-43b2-af1a-e38fb36e2a64
Simon Thomas, N.
2736b8b1-d10e-484a-bda8-8b761344a93e
Holgate, Stephen T.
2e7c17a9-6796-436e-8772-1fe6d2ac5edc
Morton, Newton
c668e2be-074a-4a0a-a2ca-e8f51830ebb7
Wilkinson, Jane
2eab5733-e987-4e00-95af-b15801d303e2
Grimley, Sarah
d152bab8-a7e0-4b46-b321-e714c2786f02
Collins, Andrew
7daa83eb-0b21-43b2-af1a-e38fb36e2a64
Simon Thomas, N.
2736b8b1-d10e-484a-bda8-8b761344a93e
Holgate, Stephen T.
2e7c17a9-6796-436e-8772-1fe6d2ac5edc
Morton, Newton
c668e2be-074a-4a0a-a2ca-e8f51830ebb7

Wilkinson, Jane, Grimley, Sarah, Collins, Andrew, Simon Thomas, N., Holgate, Stephen T. and Morton, Newton (1998) Linkage of asthma to markers on chromosome 12 in a sample of 240 families using quantitative phenotype scores. Genomics, 53 (3), 251-259. (doi:10.1006/geno.1998.5485).

Record type: Article

Abstract

We present evidence of linkage between markers on chromosome 12 and asthma using the BETA program for nonparametric single- and multipoint linkage analysis. We have used quantitative scores as our phenotypic variables, combining data into indices for asthma and atopy and maximizing heritability. The largest single-locus LODs were achieved for asthma: D12S342 and asthma score (LOD 2.255), D12S324 and asthma affection (LOD 2.214), and D12S366 and wheeze (LOD 3.307). The region of interest identified using multipoint analysis, with a maximum LOD of 2.29, centers around D12S97 at location 173.5 cM with a standard error of 6.5 for the asthma score and close agreement for asthma affection and wheeze. Such evidence merits further investigation of this area in an attempt to define the region with greater precision with a view to identifying candidate genes. We hope that the methods presented will encourage researchers to use phenotypic information in a way that encourages meta-analysis.

This record has no associated files available for download.

More information

Published date: 1 November 1998
Additional Information: Funding Information: This work is supported by an MRC project grant. J.W. is a MRC Clinical Training Fellow.

Identifiers

Local EPrints ID: 470929
URI: http://eprints.soton.ac.uk/id/eprint/470929
ISSN: 0888-7543
PURE UUID: 8488b7be-a026-4806-a769-fe21ef5de9e5
ORCID for Andrew Collins: ORCID iD orcid.org/0000-0001-7108-0771

Catalogue record

Date deposited: 21 Oct 2022 16:33
Last modified: 18 Mar 2024 02:38

Export record

Altmetrics

Contributors

Author: Jane Wilkinson
Author: Sarah Grimley
Author: Andrew Collins ORCID iD
Author: N. Simon Thomas
Author: Newton Morton

Download statistics

Downloads from ePrints over the past year. Other digital versions may also be available to download e.g. from the publisher's website.

View more statistics

Atom RSS 1.0 RSS 2.0

Contact ePrints Soton: eprints@soton.ac.uk

ePrints Soton supports OAI 2.0 with a base URL of http://eprints.soton.ac.uk/cgi/oai2

This repository has been built using EPrints software, developed at the University of Southampton, but available to everyone to use.

We use cookies to ensure that we give you the best experience on our website. If you continue without changing your settings, we will assume that you are happy to receive cookies on the University of Southampton website.

×