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Blueprint for harmonising unstandardised disease registries to allow federated data analysis: prepare for the future

Blueprint for harmonising unstandardised disease registries to allow federated data analysis: prepare for the future
Blueprint for harmonising unstandardised disease registries to allow federated data analysis: prepare for the future
Real-world evidence from multinational disease registries is becoming increasingly important not only for confirming the results of randomised controlled trials, but also for identifying phenotypes, monitoring disease progression, predicting response to new drugs and early detection of rare side-effects. With new open-access technologies, it has become feasible to harmonise patient data from different disease registries and use it for data analysis without compromising privacy rules. Here, we provide a blueprint for how a clinical research collaboration can successfully use real-world data from existing disease registries to perform federated analyses. We describe how the European severe asthma clinical research collaboration SHARP (Severe Heterogeneous Asthma Research collaboration, Patient-centred) fulfilled the harmonisation process from nonstandardised clinical registry data to the Observational Medical Outcomes Partnership Common Data Model and built a strong network of collaborators from multiple disciplines and countries. The blueprint covers organisational, financial, conceptual, technical, analytical and research aspects, and discusses both the challenges and the lessons learned. All in all, setting up a federated data network is a complex process that requires thorough preparation, but above all, it is a worthwhile investment for all clinical research collaborations, especially in view of the emerging applications of artificial intelligence and federated learning.
2312-0541
Kroes, Johannes A
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Bansal, Aruna T
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Berret, Emmanuelle
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Christian, Nils
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Kremer, Andreas
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Alloni, Anna
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Gabetta, Matteo
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Marshall, Chris
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Wagers, Scott
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Djukanovic, Ratko
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Porsbjerg, Celeste
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Hamerlijnck, Dominique
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Fulton, Olivia
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Ten Brinke, Anneke
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Bel, Elisabeth H
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Sont, Jacob K
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Kroes, Johannes A
e9ac6521-320e-4973-9e68-7f63b5391b8e
Bansal, Aruna T
35fbf858-fffc-474a-b176-28ed5a20b9c8
Berret, Emmanuelle
5f636114-847e-4752-9a67-f08d1a3651a9
Christian, Nils
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Kremer, Andreas
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Alloni, Anna
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Gabetta, Matteo
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Marshall, Chris
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Wagers, Scott
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Djukanovic, Ratko
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Porsbjerg, Celeste
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Hamerlijnck, Dominique
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Fulton, Olivia
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Ten Brinke, Anneke
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Bel, Elisabeth H
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Sont, Jacob K
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Kroes, Johannes A, Bansal, Aruna T, Berret, Emmanuelle, Christian, Nils, Kremer, Andreas, Alloni, Anna, Gabetta, Matteo, Marshall, Chris, Wagers, Scott, Djukanovic, Ratko, Porsbjerg, Celeste, Hamerlijnck, Dominique, Fulton, Olivia, Ten Brinke, Anneke, Bel, Elisabeth H and Sont, Jacob K (2022) Blueprint for harmonising unstandardised disease registries to allow federated data analysis: prepare for the future. ERJ Open Research, 8 (4), [00168-2022]. (doi:10.1183/23120541.00168-2022).

Record type: Article

Abstract

Real-world evidence from multinational disease registries is becoming increasingly important not only for confirming the results of randomised controlled trials, but also for identifying phenotypes, monitoring disease progression, predicting response to new drugs and early detection of rare side-effects. With new open-access technologies, it has become feasible to harmonise patient data from different disease registries and use it for data analysis without compromising privacy rules. Here, we provide a blueprint for how a clinical research collaboration can successfully use real-world data from existing disease registries to perform federated analyses. We describe how the European severe asthma clinical research collaboration SHARP (Severe Heterogeneous Asthma Research collaboration, Patient-centred) fulfilled the harmonisation process from nonstandardised clinical registry data to the Observational Medical Outcomes Partnership Common Data Model and built a strong network of collaborators from multiple disciplines and countries. The blueprint covers organisational, financial, conceptual, technical, analytical and research aspects, and discusses both the challenges and the lessons learned. All in all, setting up a federated data network is a complex process that requires thorough preparation, but above all, it is a worthwhile investment for all clinical research collaborations, especially in view of the emerging applications of artificial intelligence and federated learning.

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00168-2022.full - Version of Record
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Accepted/In Press date: 29 June 2022
e-pub ahead of print date: 4 October 2022
Additional Information: Copyright ©The authors 2022.

Identifiers

Local EPrints ID: 473288
URI: http://eprints.soton.ac.uk/id/eprint/473288
ISSN: 2312-0541
PURE UUID: 9c26dc99-9649-4091-a780-3928eed07c09
ORCID for Ratko Djukanovic: ORCID iD orcid.org/0000-0001-6039-5612

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Date deposited: 13 Jan 2023 17:49
Last modified: 17 Mar 2024 02:34

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Contributors

Author: Johannes A Kroes
Author: Aruna T Bansal
Author: Emmanuelle Berret
Author: Nils Christian
Author: Andreas Kremer
Author: Anna Alloni
Author: Matteo Gabetta
Author: Chris Marshall
Author: Scott Wagers
Author: Celeste Porsbjerg
Author: Dominique Hamerlijnck
Author: Olivia Fulton
Author: Anneke Ten Brinke
Author: Elisabeth H Bel
Author: Jacob K Sont

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