Blueprint for harmonising unstandardised disease registries to allow federated data analysis: prepare for the future
Blueprint for harmonising unstandardised disease registries to allow federated data analysis: prepare for the future
Real-world evidence from multinational disease registries is becoming increasingly important not only for confirming the results of randomised controlled trials, but also for identifying phenotypes, monitoring disease progression, predicting response to new drugs and early detection of rare side-effects. With new open-access technologies, it has become feasible to harmonise patient data from different disease registries and use it for data analysis without compromising privacy rules. Here, we provide a blueprint for how a clinical research collaboration can successfully use real-world data from existing disease registries to perform federated analyses. We describe how the European severe asthma clinical research collaboration SHARP (Severe Heterogeneous Asthma Research collaboration, Patient-centred) fulfilled the harmonisation process from nonstandardised clinical registry data to the Observational Medical Outcomes Partnership Common Data Model and built a strong network of collaborators from multiple disciplines and countries. The blueprint covers organisational, financial, conceptual, technical, analytical and research aspects, and discusses both the challenges and the lessons learned. All in all, setting up a federated data network is a complex process that requires thorough preparation, but above all, it is a worthwhile investment for all clinical research collaborations, especially in view of the emerging applications of artificial intelligence and federated learning.
Kroes, Johannes A
e9ac6521-320e-4973-9e68-7f63b5391b8e
Bansal, Aruna T
35fbf858-fffc-474a-b176-28ed5a20b9c8
Berret, Emmanuelle
5f636114-847e-4752-9a67-f08d1a3651a9
Christian, Nils
3d5faed7-dd7f-480e-a200-833625382e9b
Kremer, Andreas
587ced5c-74c3-446f-b377-9605ed9e33ed
Alloni, Anna
34f69297-25a6-4fd1-bf5c-d14ad8cbadac
Gabetta, Matteo
e565ca9b-0019-492d-bf66-39695341c8d5
Marshall, Chris
1f67405b-ca54-4d94-a1a6-e8fb1df7c213
Wagers, Scott
4210bc1c-ebd9-41a2-be31-b12bfa2b8c3c
Djukanovic, Ratko
d9a45ee7-6a80-4d84-a0ed-10962660a98d
Porsbjerg, Celeste
93ed020b-0d7f-4c14-98b9-f13c71fb85e4
Hamerlijnck, Dominique
20b7644f-ca6b-4cba-a63e-02112b4d7461
Fulton, Olivia
22cb99c7-f088-4a64-9a20-1c4cd429820c
Ten Brinke, Anneke
49ec2aa4-bbd9-4d3f-828d-762c5dd6695a
Bel, Elisabeth H
a4116590-ade0-4af1-9374-3147a8896a2a
Sont, Jacob K
a5c48d4f-e09f-4e90-9d3d-c626f60d149b
Kroes, Johannes A
e9ac6521-320e-4973-9e68-7f63b5391b8e
Bansal, Aruna T
35fbf858-fffc-474a-b176-28ed5a20b9c8
Berret, Emmanuelle
5f636114-847e-4752-9a67-f08d1a3651a9
Christian, Nils
3d5faed7-dd7f-480e-a200-833625382e9b
Kremer, Andreas
587ced5c-74c3-446f-b377-9605ed9e33ed
Alloni, Anna
34f69297-25a6-4fd1-bf5c-d14ad8cbadac
Gabetta, Matteo
e565ca9b-0019-492d-bf66-39695341c8d5
Marshall, Chris
1f67405b-ca54-4d94-a1a6-e8fb1df7c213
Wagers, Scott
4210bc1c-ebd9-41a2-be31-b12bfa2b8c3c
Djukanovic, Ratko
d9a45ee7-6a80-4d84-a0ed-10962660a98d
Porsbjerg, Celeste
93ed020b-0d7f-4c14-98b9-f13c71fb85e4
Hamerlijnck, Dominique
20b7644f-ca6b-4cba-a63e-02112b4d7461
Fulton, Olivia
22cb99c7-f088-4a64-9a20-1c4cd429820c
Ten Brinke, Anneke
49ec2aa4-bbd9-4d3f-828d-762c5dd6695a
Bel, Elisabeth H
a4116590-ade0-4af1-9374-3147a8896a2a
Sont, Jacob K
a5c48d4f-e09f-4e90-9d3d-c626f60d149b
Kroes, Johannes A, Bansal, Aruna T, Berret, Emmanuelle, Christian, Nils, Kremer, Andreas, Alloni, Anna, Gabetta, Matteo, Marshall, Chris, Wagers, Scott, Djukanovic, Ratko, Porsbjerg, Celeste, Hamerlijnck, Dominique, Fulton, Olivia, Ten Brinke, Anneke, Bel, Elisabeth H and Sont, Jacob K
(2022)
Blueprint for harmonising unstandardised disease registries to allow federated data analysis: prepare for the future.
ERJ Open Research, 8 (4), [00168-2022].
(doi:10.1183/23120541.00168-2022).
Abstract
Real-world evidence from multinational disease registries is becoming increasingly important not only for confirming the results of randomised controlled trials, but also for identifying phenotypes, monitoring disease progression, predicting response to new drugs and early detection of rare side-effects. With new open-access technologies, it has become feasible to harmonise patient data from different disease registries and use it for data analysis without compromising privacy rules. Here, we provide a blueprint for how a clinical research collaboration can successfully use real-world data from existing disease registries to perform federated analyses. We describe how the European severe asthma clinical research collaboration SHARP (Severe Heterogeneous Asthma Research collaboration, Patient-centred) fulfilled the harmonisation process from nonstandardised clinical registry data to the Observational Medical Outcomes Partnership Common Data Model and built a strong network of collaborators from multiple disciplines and countries. The blueprint covers organisational, financial, conceptual, technical, analytical and research aspects, and discusses both the challenges and the lessons learned. All in all, setting up a federated data network is a complex process that requires thorough preparation, but above all, it is a worthwhile investment for all clinical research collaborations, especially in view of the emerging applications of artificial intelligence and federated learning.
Text
00168-2022.full
- Version of Record
More information
Accepted/In Press date: 29 June 2022
e-pub ahead of print date: 4 October 2022
Additional Information:
Copyright ©The authors 2022.
Identifiers
Local EPrints ID: 473288
URI: http://eprints.soton.ac.uk/id/eprint/473288
ISSN: 2312-0541
PURE UUID: 9c26dc99-9649-4091-a780-3928eed07c09
Catalogue record
Date deposited: 13 Jan 2023 17:49
Last modified: 17 Mar 2024 02:34
Export record
Altmetrics
Contributors
Author:
Johannes A Kroes
Author:
Aruna T Bansal
Author:
Emmanuelle Berret
Author:
Nils Christian
Author:
Andreas Kremer
Author:
Anna Alloni
Author:
Matteo Gabetta
Author:
Chris Marshall
Author:
Scott Wagers
Author:
Celeste Porsbjerg
Author:
Dominique Hamerlijnck
Author:
Olivia Fulton
Author:
Anneke Ten Brinke
Author:
Elisabeth H Bel
Author:
Jacob K Sont
Download statistics
Downloads from ePrints over the past year. Other digital versions may also be available to download e.g. from the publisher's website.
View more statistics