READ ME File For Dataset in support of the Southampton doctoral thesis 'Development of a miniaturised system for the high throughput investigations of biofilm responses to antimicrobial agents'

Dataset DOI: 10.5258/SOTON/D2553 

ReadMe Author: JELENA PISARUKA, University of Southampton ORCID ID

This dataset supports the thesis entitled 
AWARDED BY: University of Southampton
DATE OF AWARD: 2023

Due to size (47.3 GB) Data is available on request via https://library.soton.ac.uk/datarequest

DESCRIPTION OF THE DATA
1. Images of biofilms grown by three different assays: static micro-title plate assay, dynamic assay in drip flow reactor, dynamic biofilms grown by designed and fabricated device. Images include developed biofilms after 24 hours, 48 hours and 72 hours and after exposure to different reagents. 
2.Excel file of data obtained from ImageJ software for biological images analysis.
3.Autodesk 123D files of device development steps.

This dataset contains:
Excel_files_of_imageJ_analysis.zip
Microtitle_plate_assay_static_biofilms_1.zip
Microtitle_plate_assay_static_biofilms_2.zip
Microtitle_plate_assay_static_biofilms_3.zip
Microtitle_plate_assay_static_biofilms_4.zip
DFR_48h_E.COLI_Biofilm.zip
DFR_48h_Ethanol_dose_resonse_studies.zip
DFR_48H_Esculetin_dose_response_studies.zip
DFR_48h_Ellagic_Acid_dose_response_studies.zip
DFR_48h_4_Cl_dose_resopnse_studies.zip
DFR_48h_UA_dose_response_studes.zip
DFR_48H_Penta0galloy_dose_response_studies.zip
DFR_48h_Chlorhexidine_dose_response_studies.zip
DFR_48H_Berberine_dose_response_studies.zip
DFR_48h_Tannic_acid_and_Gallic_acid_dose_response_studies.zip
DFR_72h_E.coli_dose_response_studies.zip
DFR_24h_E.coli_biofilms.zip
Devices_48h_E.coli_Biofilm.zip
Devices_48h_Tannic_Acid_dose_response_studies_1.zip
Devices_48h_Tannic_acid_dose_desponse_studies_2.zip
Devices_48h_Gallic_acid_dose_response_studies_1.zip
Devices_48h_Gallic_acid_dose_response_studies_2.zip
Devices_48h_Ethanol_dose_response_studies.zip
Devices_48h_Penta0galloy_dose_response_studies.zip
Devices_48h_UA_dose_response_studies.zip
Devices_48h_Ellagic_Acid_dose_response_studies.zip
Devices_48h_Esculetin_dose_response_studies.zip
Devices_48h_Berberine_dose_response_studies.zip
Devices_48h_Chlorhexidine_dose_response_studies.zip
Devices_48h_4_CL_dose_response_studies.zip
DEVICES_72h_biofilms_dose_response_studies.zip
DEVICE_24h_biofilms.zip
Devices_48h_Negative_controls.zip
Devices_48h_INOCULATED_DEVICE.zip
Devices_48h_CLEAR_Device_TB_staining.zip
Clear_device_and_slide.zip
NEGATIVE_CONTROL_Slides.zip
Designs_of_device.zip



Date of data collection: 2018-2022

Information about geographic location of data collection: 

Licence:
CC BY

Related projects/Funders:
Aspire Pharma

Related publication:

Date that the file was created: February 2023