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Genomic profiling for clinical decision making in lymphoid neoplasms

Genomic profiling for clinical decision making in lymphoid neoplasms
Genomic profiling for clinical decision making in lymphoid neoplasms
With the introduction of large-scale molecular profiling methods and high-throughput sequencing technologies, the genomic features of most lymphoid neoplasms have been characterized at an unprecedented scale. Although the principles for the classification and diagnosis of these disorders, founded on a multidimensional definition of disease entities, have been consolidated over the past 25 years, novel genomic data have markedly enhanced our understanding of lymphomagenesis and enriched the description of disease entities at the molecular level. Yet, the current diagnosis of lymphoid tumors is largely based on morphological assessment and immunophenotyping, with only few entities being defined by genomic criteria. This paper, which accompanies the International Consensus Classification of mature lymphoid neoplasms, will address how established assays and newly developed technologies for molecular testing already complement clinical diagnoses and provide a novel lens on disease classification. More specifically, their contributions to diagnosis refinement, risk stratification, and therapy prediction will be considered for the main categories of lymphoid neoplasms. The potential of whole-genome sequencing, circulating tumor DNA analyses, single-cell analyses, and epigenetic profiling will be discussed because these will likely become important future tools for implementing precision medicine approaches in clinical decision making for patients with lymphoid malignancies.
0006-4971
2193-2227
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De Leval, Laurence, Alizadeh, Ash A., Bergsagel, P. Leif, Campo, Elias, Davies, Andrew, Dogan, Ahmet, Fitzgibbon, Jude, Horwitz, Steven M., Melnick, Ari M., Morice, William G., Morin, Ryan D., Nadel, Bertrand, Pileri, Stefano A., Rosenquist, Richard, Rossi, Davide, Salaverria, Itziar, Steidl, Christian, Treon, Steven P., Zelenetz, Andrew D., Advani, Ranjana H., Allen, Carl E., Ansell, Stephen M., Chan, Wing C., Cook, James R., Cook, Lucy B., D’amore, Francesco, Dirnhofer, Stefan, Dreyling, Martin, Dunleavy, Kieron, Feldman, Andrew L., Fend, Falko, Gaulard, Philippe, Ghia, Paolo, Gribben, John G., Hermine, Olivier, Hodson, Daniel J., Hsi, Eric D., Inghirami, Giorgio, Jaffe, Elaine S., Karube, Kennosuke, Kataoka, Keisuke, Klapper, Wolfram, Kim, Won Seog, King, Rebecca L., Ko, Young H., Lacasce, Ann S., Lenz, Georg, Martin-subero, José I., Piris, Miguel A., Pittaluga, Stefania, Pasqualucci, Laura, Quintanilla-martinez, Leticia, Rodig, Scott J., Rosenwald, Andreas, Salles, Gilles A., San-miguel, Jesus, Savage, Kerry J., Sehn, Laurie H., Semenzato, Gianpietro, Staudt, Louis M., Swerdlow, Steven H., Tam, Constantine S., Trotman, Judith, Vose, Julie M., Weigert, Oliver, Wilson, Wyndham H., Winter, Jane N., Wu, Catherine J., Zinzani, Pier L., Zucca, Emanuele, Bagg, Adam and Scott, David W. (2022) Genomic profiling for clinical decision making in lymphoid neoplasms. Blood, 140 (21), 2193-2227. (doi:10.1182/blood.2022015854).

Record type: Article

Abstract

With the introduction of large-scale molecular profiling methods and high-throughput sequencing technologies, the genomic features of most lymphoid neoplasms have been characterized at an unprecedented scale. Although the principles for the classification and diagnosis of these disorders, founded on a multidimensional definition of disease entities, have been consolidated over the past 25 years, novel genomic data have markedly enhanced our understanding of lymphomagenesis and enriched the description of disease entities at the molecular level. Yet, the current diagnosis of lymphoid tumors is largely based on morphological assessment and immunophenotyping, with only few entities being defined by genomic criteria. This paper, which accompanies the International Consensus Classification of mature lymphoid neoplasms, will address how established assays and newly developed technologies for molecular testing already complement clinical diagnoses and provide a novel lens on disease classification. More specifically, their contributions to diagnosis refinement, risk stratification, and therapy prediction will be considered for the main categories of lymphoid neoplasms. The potential of whole-genome sequencing, circulating tumor DNA analyses, single-cell analyses, and epigenetic profiling will be discussed because these will likely become important future tools for implementing precision medicine approaches in clinical decision making for patients with lymphoid malignancies.

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Accepted/In Press date: 15 August 2022
Published date: 24 November 2022

Identifiers

Local EPrints ID: 476153
URI: http://eprints.soton.ac.uk/id/eprint/476153
ISSN: 0006-4971
PURE UUID: ffacbc76-1288-46a2-9814-b0045a1001cb
ORCID for Andrew Davies: ORCID iD orcid.org/0000-0002-7517-6938

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Date deposited: 12 Apr 2023 16:55
Last modified: 17 Mar 2024 03:14

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Contributors

Author: Laurence De Leval
Author: Ash A. Alizadeh
Author: P. Leif Bergsagel
Author: Elias Campo
Author: Andrew Davies ORCID iD
Author: Ahmet Dogan
Author: Jude Fitzgibbon
Author: Steven M. Horwitz
Author: Ari M. Melnick
Author: William G. Morice
Author: Ryan D. Morin
Author: Bertrand Nadel
Author: Stefano A. Pileri
Author: Richard Rosenquist
Author: Davide Rossi
Author: Itziar Salaverria
Author: Christian Steidl
Author: Steven P. Treon
Author: Andrew D. Zelenetz
Author: Ranjana H. Advani
Author: Carl E. Allen
Author: Stephen M. Ansell
Author: Wing C. Chan
Author: James R. Cook
Author: Lucy B. Cook
Author: Francesco D’amore
Author: Stefan Dirnhofer
Author: Martin Dreyling
Author: Kieron Dunleavy
Author: Andrew L. Feldman
Author: Falko Fend
Author: Philippe Gaulard
Author: Paolo Ghia
Author: John G. Gribben
Author: Olivier Hermine
Author: Daniel J. Hodson
Author: Eric D. Hsi
Author: Giorgio Inghirami
Author: Elaine S. Jaffe
Author: Kennosuke Karube
Author: Keisuke Kataoka
Author: Wolfram Klapper
Author: Won Seog Kim
Author: Rebecca L. King
Author: Young H. Ko
Author: Ann S. Lacasce
Author: Georg Lenz
Author: José I. Martin-subero
Author: Miguel A. Piris
Author: Stefania Pittaluga
Author: Laura Pasqualucci
Author: Leticia Quintanilla-martinez
Author: Scott J. Rodig
Author: Andreas Rosenwald
Author: Gilles A. Salles
Author: Jesus San-miguel
Author: Kerry J. Savage
Author: Laurie H. Sehn
Author: Gianpietro Semenzato
Author: Louis M. Staudt
Author: Steven H. Swerdlow
Author: Constantine S. Tam
Author: Judith Trotman
Author: Julie M. Vose
Author: Oliver Weigert
Author: Wyndham H. Wilson
Author: Jane N. Winter
Author: Catherine J. Wu
Author: Pier L. Zinzani
Author: Emanuele Zucca
Author: Adam Bagg
Author: David W. Scott

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