Prostate cancer tissue classification by multiphoton imaging, automated image analysis and machine learning
Prostate cancer tissue classification by multiphoton imaging, automated image analysis and machine learning
Prostate carcinoma, a slow-growing and often indolent tumour, is the second most commonly diagnosed cancer among men worldwide. The prognosis is mainly based on the Gleason system through prostate biopsy analysis. However, new treatment and monitoring strategies depend on a more precise diagnosis. Here, we present results by multiphoton imaging for prostate tumour samples from 120 patients that allow to obtain quantitative parameters leading to specific tumour aggressiveness signatures. An automated image analysis was developed to recognise and quantify stromal fibre and neoplastic cell regions in each image. The set of metrics was able to distinguish between non-neoplastic tissue and carcinoma areas by linear discriminant analysis and random forest with accuracy of 89% ± 3%, but between Gleason groups of only 46% ± 6%. The reactive stroma analysis improved the accuracy to 65% ± 5%, clearly demonstrating that stromal parameters should be considered as additional criteria for a more accurate diagnosis.
diagnosis, machine learning, multiphoton imaging, prostate cancer, reactive stroma
Gomes, Egleidson Frederik Do Amaral
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Junior, Eduardo Paulino
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de Lima, Mario F.R.
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Reis, Luana A.
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Paranhos, Giovanna
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Mamede, Marcelo
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Longford, Frank
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Frey, Jeremy G.
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de Paula, Ana Maria
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20 February 2023
Gomes, Egleidson Frederik Do Amaral
968f9638-8d5d-408e-8522-a418ffcf19ef
Junior, Eduardo Paulino
997ab3d3-15c3-4bc0-89be-9c9c8f003f0a
de Lima, Mario F.R.
7485444e-0f3b-4c38-8121-31c6d842337c
Reis, Luana A.
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Paranhos, Giovanna
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Mamede, Marcelo
792632e4-24b7-42d6-934a-d7c5854791ef
Longford, Frank
2d5101ed-f991-47fd-bbe5-08f3ed24bc9b
Frey, Jeremy G.
ba60c559-c4af-44f1-87e6-ce69819bf23f
de Paula, Ana Maria
700c8cfd-1696-42a6-8f92-c4974eb24d3a
Gomes, Egleidson Frederik Do Amaral, Junior, Eduardo Paulino, de Lima, Mario F.R., Reis, Luana A., Paranhos, Giovanna, Mamede, Marcelo, Longford, Frank, Frey, Jeremy G. and de Paula, Ana Maria
(2023)
Prostate cancer tissue classification by multiphoton imaging, automated image analysis and machine learning.
Journal of Biophotonics, 16 (6), [e202200382].
(doi:10.1002/jbio.202200382).
Abstract
Prostate carcinoma, a slow-growing and often indolent tumour, is the second most commonly diagnosed cancer among men worldwide. The prognosis is mainly based on the Gleason system through prostate biopsy analysis. However, new treatment and monitoring strategies depend on a more precise diagnosis. Here, we present results by multiphoton imaging for prostate tumour samples from 120 patients that allow to obtain quantitative parameters leading to specific tumour aggressiveness signatures. An automated image analysis was developed to recognise and quantify stromal fibre and neoplastic cell regions in each image. The set of metrics was able to distinguish between non-neoplastic tissue and carcinoma areas by linear discriminant analysis and random forest with accuracy of 89% ± 3%, but between Gleason groups of only 46% ± 6%. The reactive stroma analysis improved the accuracy to 65% ± 5%, clearly demonstrating that stromal parameters should be considered as additional criteria for a more accurate diagnosis.
Text
gomes2023-manuscript
- Accepted Manuscript
More information
Accepted/In Press date: 16 February 2023
e-pub ahead of print date: 20 February 2023
Published date: 20 February 2023
Additional Information:
Funding Information:
This work was financially supported by the Brazilian agencies Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq), Fundação de Amparo à Pesquisa do Estado de Minas Gerais (Fapemig), Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Capes) and Institute of Science and Technology (INCT) in Carbon Nanomaterials, and by the Engineering and Physical Sciences Research Council, grant No. EP/G03690X/1 at the University of Southampton.
Keywords:
diagnosis, machine learning, multiphoton imaging, prostate cancer, reactive stroma
Identifiers
Local EPrints ID: 477722
URI: http://eprints.soton.ac.uk/id/eprint/477722
ISSN: 1864-063X
PURE UUID: cd007672-e41c-4372-9b7d-c2639353e6ec
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Date deposited: 13 Jun 2023 17:20
Last modified: 30 Aug 2024 04:01
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Contributors
Author:
Egleidson Frederik Do Amaral Gomes
Author:
Eduardo Paulino Junior
Author:
Mario F.R. de Lima
Author:
Luana A. Reis
Author:
Giovanna Paranhos
Author:
Marcelo Mamede
Author:
Frank Longford
Author:
Ana Maria de Paula
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