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Identification and optimization of a novel series of selective PIP5K inhibitors

Identification and optimization of a novel series of selective PIP5K inhibitors
Identification and optimization of a novel series of selective PIP5K inhibitors

Phosphatidyl inositol (4,5)-bisphosphate (PI(4,5)P 2) plays several key roles in human biology and the lipid kinase that produces PI(4,5)P 2, PIP5K, has been hypothesized to provide a potential therapeutic target of interest in the treatment of cancers. To better understand and explore the role of PIP5K in human cancers there remains an urgent need for potent and specific PIP5K inhibitor molecules. Following a high throughput screen of the AstraZeneca collection, a novel, moderately potent and selective inhibitor of PIP5K, 1, was discovered. Detailed exploration of the SAR for this novel scaffold resulted in the considerable optimization of both potency for PIP5K, and selectivity over the closely related kinase PI3Kα, as well as identifying several opportunities for the continued optimization of drug-like properties. As a result, several high quality in vitro tool compounds were identified (8, 20 and 25) that demonstrate the desired biochemical and cellular profiles required to aid better understanding of this complex area of biology.

amides/chemistry/metabolism/*pharmacology Animals Caco-2 Cells Dose-Response Relationship, Drug Enzyme Inhibitors/chemistry/metabolism/*pharmacology Humans Microsomes, Liver/chemistry/metabolism Molecular Structure Phosphotransferases (Alcohol Group Acceptor)/*antagonists & inhibitors/metabolism Rats Structure-Activity Relationship In vitro tools Lipid kinase inhibitors Oncology Pi3k Pip5k
0968-0896
Andrews, D.M.
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Cartic, S.
7d45b5f6-f4fa-4401-b8fb-49054a9fcc75
Cosulich, S.
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Divecha, N.
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Faulder, P.
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Flemington, V.
f6781b28-8f7e-4105-ba02-09e0032c1fc2
Kern, O.
ae102d87-3274-49d2-b0ec-be2ce6bfce1a
Kettle, J.G.
91a228a4-1395-4ecd-b104-4e8704f02455
MacDonald, E.
8c54d170-3cd3-459d-a3f2-0b85cbb8f2cb
McKelvie, J.
caa1555e-9c45-429b-9ca6-1efbe5ee42c1
Pike, K.G.
99a84385-a195-43f1-bd68-2af0af420c95
Roberts, B.
ba9aa15b-2857-4761-8f7c-171cd36e11d2
Rowlinson, R.
eb89411e-35de-4703-b00b-a89191ecf8cb
Agnos, J.M.
fa189e55-52ee-47ed-8205-c06102ddc101
Stockley, M.
fd8e48fa-cd20-4326-8608-795fb84cfda4
Swarbrick, M.E.
bbb8e04e-902c-447a-b066-c022220cfd46
Treinies, I.
20695251-b3a5-4e4e-ba2a-9acf2d160af1
Waring, M.J.
778971c0-a442-4808-ad80-b333f3dc1597
Andrews, D.M.
b0941b2f-eb15-43ae-b3a4-873904de416c
Cartic, S.
7d45b5f6-f4fa-4401-b8fb-49054a9fcc75
Cosulich, S.
f4fc4b06-e783-4241-a0ff-6a3b48cb1c50
Divecha, N.
5c2ad0f8-4ce7-405f-8a15-2fc4ab96d787
Faulder, P.
1b3628df-8df3-4cdb-a2e3-10d893f04c56
Flemington, V.
f6781b28-8f7e-4105-ba02-09e0032c1fc2
Kern, O.
ae102d87-3274-49d2-b0ec-be2ce6bfce1a
Kettle, J.G.
91a228a4-1395-4ecd-b104-4e8704f02455
MacDonald, E.
8c54d170-3cd3-459d-a3f2-0b85cbb8f2cb
McKelvie, J.
caa1555e-9c45-429b-9ca6-1efbe5ee42c1
Pike, K.G.
99a84385-a195-43f1-bd68-2af0af420c95
Roberts, B.
ba9aa15b-2857-4761-8f7c-171cd36e11d2
Rowlinson, R.
eb89411e-35de-4703-b00b-a89191ecf8cb
Agnos, J.M.
fa189e55-52ee-47ed-8205-c06102ddc101
Stockley, M.
fd8e48fa-cd20-4326-8608-795fb84cfda4
Swarbrick, M.E.
bbb8e04e-902c-447a-b066-c022220cfd46
Treinies, I.
20695251-b3a5-4e4e-ba2a-9acf2d160af1
Waring, M.J.
778971c0-a442-4808-ad80-b333f3dc1597

Andrews, D.M., Cartic, S., Cosulich, S., Divecha, N., Faulder, P., Flemington, V., Kern, O., Kettle, J.G., MacDonald, E., McKelvie, J., Pike, K.G., Roberts, B., Rowlinson, R., Agnos, J.M., Stockley, M., Swarbrick, M.E., Treinies, I. and Waring, M.J. (2021) Identification and optimization of a novel series of selective PIP5K inhibitors. Bioorganic & Medicinal Chemistry, 54, [116557]. (doi:10.1016/j.bmc.2021.116557).

Record type: Article

Abstract

Phosphatidyl inositol (4,5)-bisphosphate (PI(4,5)P 2) plays several key roles in human biology and the lipid kinase that produces PI(4,5)P 2, PIP5K, has been hypothesized to provide a potential therapeutic target of interest in the treatment of cancers. To better understand and explore the role of PIP5K in human cancers there remains an urgent need for potent and specific PIP5K inhibitor molecules. Following a high throughput screen of the AstraZeneca collection, a novel, moderately potent and selective inhibitor of PIP5K, 1, was discovered. Detailed exploration of the SAR for this novel scaffold resulted in the considerable optimization of both potency for PIP5K, and selectivity over the closely related kinase PI3Kα, as well as identifying several opportunities for the continued optimization of drug-like properties. As a result, several high quality in vitro tool compounds were identified (8, 20 and 25) that demonstrate the desired biochemical and cellular profiles required to aid better understanding of this complex area of biology.

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More information

Accepted/In Press date: 3 December 2021
e-pub ahead of print date: 12 December 2021
Published date: 16 December 2021
Additional Information: Funding Information: The authors would like to acknowledge the support and advice of Richard Luke (AstraZeneca) in the analysis of the HTS data,the AstraZeneca Chemists Lorraine Hassall, Mike James, Paul Kemmitt, Scott Lamont and Paul Bethel for their work synthesizing analogues of the compounds described herein to help inform SAR and David Jones for his work on developing the cellular PIP2 assay. The Analytical and Purification teams at AstraZeneca are thanked for their contributions. James S. Scott is thanked for his valuable contributions regarding the manuscript.
Keywords: amides/chemistry/metabolism/*pharmacology Animals Caco-2 Cells Dose-Response Relationship, Drug Enzyme Inhibitors/chemistry/metabolism/*pharmacology Humans Microsomes, Liver/chemistry/metabolism Molecular Structure Phosphotransferases (Alcohol Group Acceptor)/*antagonists & inhibitors/metabolism Rats Structure-Activity Relationship In vitro tools Lipid kinase inhibitors Oncology Pi3k Pip5k

Identifiers

Local EPrints ID: 478575
URI: http://eprints.soton.ac.uk/id/eprint/478575
ISSN: 0968-0896
PURE UUID: 6d728703-67ee-483d-8d8c-da882e562afa

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Date deposited: 05 Jul 2023 17:10
Last modified: 16 Mar 2024 15:33

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Contributors

Author: D.M. Andrews
Author: S. Cartic
Author: S. Cosulich
Author: N. Divecha
Author: P. Faulder
Author: V. Flemington
Author: O. Kern
Author: J.G. Kettle
Author: E. MacDonald
Author: J. McKelvie
Author: K.G. Pike
Author: B. Roberts
Author: R. Rowlinson
Author: J.M. Agnos
Author: M. Stockley
Author: M.E. Swarbrick
Author: I. Treinies
Author: M.J. Waring

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