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Diffusion-limited growth of microbial colonies

Diffusion-limited growth of microbial colonies
Diffusion-limited growth of microbial colonies

The emergence of diffusion-limited growth (DLG) within a microbial colony on a solid substrate is studied using a combination of mathematical modelling and experiments. Using an agent-based model of the interaction between microbial cells and a diffusing nutrient, it is shown that growth directed towards a nutrient source may be used as an indicator that DLG is influencing the colony morphology. A continuous reaction-diffusion model for microbial growth is employed to identify the parameter regime in which DLG is expected to arise. Comparisons between the model and experimental data are used to argue that the bacterium Bacillus subtilis can undergo DLG, while the yeast Saccharomyces cerevisiae cannot, and thus the non-uniform growth exhibited by this yeast must be caused by the pseudohyphal growth mode rather than limited nutrient availability. Experiments testing directly for DLG features in yeast colonies are used to confirm this hypothesis.

2045-2322
Tronnolone, Hayden
c17ba912-b652-49de-a1cc-7c120ee9a19c
Tam, Alexander
4037506d-a50e-4a08-8a92-d2022a387932
Szenczi, Zoltán
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Green, J. E.F.
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Balasuriya, Sanjeeva
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Tek, Ee Lin
7692691a-a6a2-4a7b-964e-235f8ea0ec03
Gardner, Jennifer M.
0d95188b-206d-4817-8437-e163351f6e7f
Sundstrom, Joanna F.
6c6b3452-dfb3-4b5c-aa42-c721eed7b9bb
Jiranek, Vladimir
8e5a8dfd-f5b2-43e3-928b-11dff324abc7
Oliver, Stephen G.
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Binder, Benjamin J.
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Tronnolone, Hayden
c17ba912-b652-49de-a1cc-7c120ee9a19c
Tam, Alexander
4037506d-a50e-4a08-8a92-d2022a387932
Szenczi, Zoltán
14f258d9-687d-408f-b358-e13af6054fba
Green, J. E.F.
acf66366-3833-4202-b343-b89179b77432
Balasuriya, Sanjeeva
42c5f7a4-ba27-4410-a64e-8a2bfdba19a9
Tek, Ee Lin
7692691a-a6a2-4a7b-964e-235f8ea0ec03
Gardner, Jennifer M.
0d95188b-206d-4817-8437-e163351f6e7f
Sundstrom, Joanna F.
6c6b3452-dfb3-4b5c-aa42-c721eed7b9bb
Jiranek, Vladimir
8e5a8dfd-f5b2-43e3-928b-11dff324abc7
Oliver, Stephen G.
c3de796f-4c50-4812-a383-208f23b3cd32
Binder, Benjamin J.
4b861311-8ad2-417c-903a-1d35e541d14b

Tronnolone, Hayden, Tam, Alexander, Szenczi, Zoltán, Green, J. E.F., Balasuriya, Sanjeeva, Tek, Ee Lin, Gardner, Jennifer M., Sundstrom, Joanna F., Jiranek, Vladimir, Oliver, Stephen G. and Binder, Benjamin J. (2018) Diffusion-limited growth of microbial colonies. Scientific Reports, 8 (1), [5992]. (doi:10.1038/s41598-018-23649-z).

Record type: Article

Abstract

The emergence of diffusion-limited growth (DLG) within a microbial colony on a solid substrate is studied using a combination of mathematical modelling and experiments. Using an agent-based model of the interaction between microbial cells and a diffusing nutrient, it is shown that growth directed towards a nutrient source may be used as an indicator that DLG is influencing the colony morphology. A continuous reaction-diffusion model for microbial growth is employed to identify the parameter regime in which DLG is expected to arise. Comparisons between the model and experimental data are used to argue that the bacterium Bacillus subtilis can undergo DLG, while the yeast Saccharomyces cerevisiae cannot, and thus the non-uniform growth exhibited by this yeast must be caused by the pseudohyphal growth mode rather than limited nutrient availability. Experiments testing directly for DLG features in yeast colonies are used to confirm this hypothesis.

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s41598-018-23649-z - Version of Record
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More information

Accepted/In Press date: 14 March 2018
e-pub ahead of print date: 16 April 2018
Published date: 1 December 2018

Identifiers

Local EPrints ID: 482983
URI: http://eprints.soton.ac.uk/id/eprint/482983
ISSN: 2045-2322
PURE UUID: 4b8ebf4f-495f-4945-aaa4-c31d73fcab35
ORCID for Vladimir Jiranek: ORCID iD orcid.org/0000-0002-9775-8963

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Date deposited: 18 Oct 2023 16:37
Last modified: 18 Mar 2024 04:12

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Contributors

Author: Hayden Tronnolone
Author: Alexander Tam
Author: Zoltán Szenczi
Author: J. E.F. Green
Author: Sanjeeva Balasuriya
Author: Ee Lin Tek
Author: Jennifer M. Gardner
Author: Joanna F. Sundstrom
Author: Vladimir Jiranek ORCID iD
Author: Stephen G. Oliver
Author: Benjamin J. Binder

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