The University of Southampton
University of Southampton Institutional Repository

Metabolomics of head and neck cancer in biofluids: an integrative systematic review

Metabolomics of head and neck cancer in biofluids: an integrative systematic review
Metabolomics of head and neck cancer in biofluids: an integrative systematic review
Introduction: head and neck cancer (HNC) is the fifth most common cancer globally. Diagnosis at early stages are critical to reduce mortality and improve functional and esthetic outcomes associated with HNC. Metabolomics is a promising approach for discovery of biomarkers and metabolic pathways for risk assessment and early detection of HNC.

Objectives: to summarize and consolidate the available evidence on metabolomics and HNC in plasma/serum, saliva, and urine.

Methods: a systematic search of experimental research was executed using PubMed and Web of Science. Available data on areas under the curve was extracted. Metabolic pathway enrichment analysis were performed to identify metabolic pathways altered in HNC. Fifty-four studies were eligible for data extraction (33 performed in plasma/serum, 15 in saliva and 6 in urine).

Results: metabolites with high discriminatory performance for detection of HNC included single metabolites and combination panels of several lysoPCs, pyroglutamate, glutamic acid, glucose, tartronic acid, arachidonic acid, norvaline, linoleic acid, propionate, acetone, acetate, choline, glutamate and others. The glucose-alanine cycle and the urea cycle were the most altered pathways in HNC, among other pathways (i.e. gluconeogenesis, glycine and serine metabolism, alanine metabolism, etc.). Specific metabolites that can potentially serve as complementary less- or non-invasive biomarkers, as well as metabolic pathways integrating the data from the available studies, are presented.

Conclusion: the present work highlights utility of metabolite-based biomarkers for risk assessment, early detection, and prognostication of HNC, as well as facilitates incorporation of available metabolomics studies into multi-omics data integration and big data analytics for personalized health.
Big data, Biomarkers, Head and neck cancer, Malignancies, Metabolites, Metabolome, Metabolomics, Omics, Oncology, Personalized health, Squamous cell carcinoma
1573-3882
Chuchueva, Natalia
7fb8eba7-3e6f-4fbb-accf-ff851878d80e
Carta, Filippo
fef9143d-47eb-4704-9446-207b037a8744
Nguyen, Hoang N.
f507ff68-d262-423e-9449-ea045da27069
Luevano, Jennifer
0edbf50d-2b5d-42c4-a70c-47f998be8d45
Lewis, Isaiah A.
5264f38c-fb3a-4360-acb2-b535707a53a5
Rios-Castillo, Israel
7214d4bb-4e3b-4b0e-a91d-81275e9c74c2
Fanos, Vassilios
54ad9c73-72d8-44a4-8c76-02f38c7d6f0e
King, Emma
d85e0e8f-7295-4912-9052-646a790d99db
Swistushkin, Valery
7dd814b8-93d3-416e-9d99-b2bcc652fd63
Reshetov, Igor
1de79178-6522-4924-8b73-b0372d31add4
Rusetsky, Yury
1e99036a-bd95-4c81-a90f-f0280be352d4
Shestakova, Ksenia
4b256721-4778-4d5b-8180-bfe44aa40cd1
Moskaleva, Natalia
164e1ed1-ab80-4ce7-8d43-5e7392e053e2
Mariani, Cinzia
0ae782f5-a26c-4ef3-abf5-b9e76a40a3ab
Castillo-Carniglia, Alvaro
7bfc7b18-58f1-4e36-ae40-72e76c9e28be
Grapov, Dmitry
a65ba8e2-fc12-411f-8410-b82e8ea02eca
Fahrmann, Johannes
13f4d00a-3e6d-4522-97cf-7b7cbeef8edc
La Frano, Michael R.
d39ceffd-17a6-4d4d-8a5e-72d31bc9b10d
Puxeddu, Roberto
0b57a307-2f8b-4586-a0c3-49266710836c
Appolonova, Svetlana A.
e4e906fc-da2a-426e-ab82-3c8f2fae0422
Brito, Alex
1705eda8-9f64-450c-80b7-d664c550ae3b
Chuchueva, Natalia
7fb8eba7-3e6f-4fbb-accf-ff851878d80e
Carta, Filippo
fef9143d-47eb-4704-9446-207b037a8744
Nguyen, Hoang N.
f507ff68-d262-423e-9449-ea045da27069
Luevano, Jennifer
0edbf50d-2b5d-42c4-a70c-47f998be8d45
Lewis, Isaiah A.
5264f38c-fb3a-4360-acb2-b535707a53a5
Rios-Castillo, Israel
7214d4bb-4e3b-4b0e-a91d-81275e9c74c2
Fanos, Vassilios
54ad9c73-72d8-44a4-8c76-02f38c7d6f0e
King, Emma
d85e0e8f-7295-4912-9052-646a790d99db
Swistushkin, Valery
7dd814b8-93d3-416e-9d99-b2bcc652fd63
Reshetov, Igor
1de79178-6522-4924-8b73-b0372d31add4
Rusetsky, Yury
1e99036a-bd95-4c81-a90f-f0280be352d4
Shestakova, Ksenia
4b256721-4778-4d5b-8180-bfe44aa40cd1
Moskaleva, Natalia
164e1ed1-ab80-4ce7-8d43-5e7392e053e2
Mariani, Cinzia
0ae782f5-a26c-4ef3-abf5-b9e76a40a3ab
Castillo-Carniglia, Alvaro
7bfc7b18-58f1-4e36-ae40-72e76c9e28be
Grapov, Dmitry
a65ba8e2-fc12-411f-8410-b82e8ea02eca
Fahrmann, Johannes
13f4d00a-3e6d-4522-97cf-7b7cbeef8edc
La Frano, Michael R.
d39ceffd-17a6-4d4d-8a5e-72d31bc9b10d
Puxeddu, Roberto
0b57a307-2f8b-4586-a0c3-49266710836c
Appolonova, Svetlana A.
e4e906fc-da2a-426e-ab82-3c8f2fae0422
Brito, Alex
1705eda8-9f64-450c-80b7-d664c550ae3b

Chuchueva, Natalia, Carta, Filippo, Nguyen, Hoang N., Luevano, Jennifer, Lewis, Isaiah A., Rios-Castillo, Israel, Fanos, Vassilios, King, Emma, Swistushkin, Valery, Reshetov, Igor, Rusetsky, Yury, Shestakova, Ksenia, Moskaleva, Natalia, Mariani, Cinzia, Castillo-Carniglia, Alvaro, Grapov, Dmitry, Fahrmann, Johannes, La Frano, Michael R., Puxeddu, Roberto, Appolonova, Svetlana A. and Brito, Alex (2023) Metabolomics of head and neck cancer in biofluids: an integrative systematic review. Metabolomics, 19 (9), [77]. (doi:10.1007/s11306-023-02038-2).

Record type: Review

Abstract

Introduction: head and neck cancer (HNC) is the fifth most common cancer globally. Diagnosis at early stages are critical to reduce mortality and improve functional and esthetic outcomes associated with HNC. Metabolomics is a promising approach for discovery of biomarkers and metabolic pathways for risk assessment and early detection of HNC.

Objectives: to summarize and consolidate the available evidence on metabolomics and HNC in plasma/serum, saliva, and urine.

Methods: a systematic search of experimental research was executed using PubMed and Web of Science. Available data on areas under the curve was extracted. Metabolic pathway enrichment analysis were performed to identify metabolic pathways altered in HNC. Fifty-four studies were eligible for data extraction (33 performed in plasma/serum, 15 in saliva and 6 in urine).

Results: metabolites with high discriminatory performance for detection of HNC included single metabolites and combination panels of several lysoPCs, pyroglutamate, glutamic acid, glucose, tartronic acid, arachidonic acid, norvaline, linoleic acid, propionate, acetone, acetate, choline, glutamate and others. The glucose-alanine cycle and the urea cycle were the most altered pathways in HNC, among other pathways (i.e. gluconeogenesis, glycine and serine metabolism, alanine metabolism, etc.). Specific metabolites that can potentially serve as complementary less- or non-invasive biomarkers, as well as metabolic pathways integrating the data from the available studies, are presented.

Conclusion: the present work highlights utility of metabolite-based biomarkers for risk assessment, early detection, and prognostication of HNC, as well as facilitates incorporation of available metabolomics studies into multi-omics data integration and big data analytics for personalized health.

Text
2023 Chuchueva et al. Metabolomics Head and Neck cancer - Version of Record
Restricted to Repository staff only
Request a copy

More information

Accepted/In Press date: 27 July 2023
e-pub ahead of print date: 29 August 2023
Published date: September 2023
Additional Information: Funding Information: The work was financed by the Ministry of Science and Higher Education of the Russian Federation within the framework of state support for the creation and development of World-Class Research Centers “Digital Biodesign and Personalized Healthcare” Nº075-15–2022-304. ACC received funding from the Millennium Science Initiative Program, Nº NCS2021_003 and Nº NCS2021_013. Publisher Copyright: © 2023, The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.
Keywords: Big data, Biomarkers, Head and neck cancer, Malignancies, Metabolites, Metabolome, Metabolomics, Omics, Oncology, Personalized health, Squamous cell carcinoma

Identifiers

Local EPrints ID: 485197
URI: http://eprints.soton.ac.uk/id/eprint/485197
ISSN: 1573-3882
PURE UUID: b047be53-d474-44a4-927f-40c279559cd8

Catalogue record

Date deposited: 01 Dec 2023 17:31
Last modified: 17 Mar 2024 06:09

Export record

Altmetrics

Contributors

Author: Natalia Chuchueva
Author: Filippo Carta
Author: Hoang N. Nguyen
Author: Jennifer Luevano
Author: Isaiah A. Lewis
Author: Israel Rios-Castillo
Author: Vassilios Fanos
Author: Emma King
Author: Valery Swistushkin
Author: Igor Reshetov
Author: Yury Rusetsky
Author: Ksenia Shestakova
Author: Natalia Moskaleva
Author: Cinzia Mariani
Author: Alvaro Castillo-Carniglia
Author: Dmitry Grapov
Author: Johannes Fahrmann
Author: Michael R. La Frano
Author: Roberto Puxeddu
Author: Svetlana A. Appolonova
Author: Alex Brito

Download statistics

Downloads from ePrints over the past year. Other digital versions may also be available to download e.g. from the publisher's website.

View more statistics

Atom RSS 1.0 RSS 2.0

Contact ePrints Soton: eprints@soton.ac.uk

ePrints Soton supports OAI 2.0 with a base URL of http://eprints.soton.ac.uk/cgi/oai2

This repository has been built using EPrints software, developed at the University of Southampton, but available to everyone to use.

We use cookies to ensure that we give you the best experience on our website. If you continue without changing your settings, we will assume that you are happy to receive cookies on the University of Southampton website.

×