MYOD-SKP2 axis boosts tumorigenesis in fusion negative rhabdomyosarcoma by preventing differentiation through p57Kip2 targeting
MYOD-SKP2 axis boosts tumorigenesis in fusion negative rhabdomyosarcoma by preventing differentiation through p57Kip2 targeting
Rhabdomyosarcomas (RMS) are pediatric mesenchymal-derived malignancies encompassing PAX3/7-FOXO1 Fusion Positive (FP)-RMS, and Fusion Negative (FN)-RMS with frequent RAS pathway mutations. RMS express the master myogenic transcription factor MYOD that, whilst essential for survival, cannot support differentiation. Here we discover SKP2, an oncogenic E3-ubiquitin ligase, as a critical pro-tumorigenic driver in FN-RMS. We show that SKP2 is overexpressed in RMS through the binding of MYOD to an intronic enhancer. SKP2 in FN-RMS promotes cell cycle progression and prevents differentiation by directly targeting p27Kip1 and p57Kip2, respectively. SKP2 depletion unlocks a partly MYOD-dependent myogenic transcriptional program and strongly affects stemness and tumorigenic features and prevents in vivo tumor growth. These effects are mirrored by the investigational NEDDylation inhibitor MLN4924. Results demonstrate a crucial crosstalk between transcriptional and post-translational mechanisms through the MYOD-SKP2 axis that contributes to tumorigenesis in FN-RMS. Finally, NEDDylation inhibition is identified as a potential therapeutic vulnerability in FN-RMS.
Carcinogenesis/genetics, Cell Line, Tumor, Child, Humans, Rhabdomyosarcoma/genetics, Transcription Factors
Pomella, Silvia
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Cassandri, Matteo
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D'Archivio, Lucrezia
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Phelps, Doris
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Perrone, Clara
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Wachtel, Marco
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Milewski, David
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Colletti, Marta
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Sreenivas, Prethish
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Walters, Zoë S.
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Di Giannatale, Angela
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Milano, Giuseppe Maria
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Carlesso, Nadia
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Vakoc, Christopher R.
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Velardi, Enrico
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Guccione, Ernesto
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Yohe, Marielle
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Ignatius, Myron
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Quintarelli, Concetta
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Shipley, Janet
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Miele, Lucio
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Khan, Javed
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Houghton, Peter J.
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Marampon, Francesco
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Gryder, Berkley E.
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De Angelis, Biagio
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Locatelli, Franco
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Rota, Rossella
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15 December 2023
Pomella, Silvia
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Cassandri, Matteo
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Porrazzo, Antonella
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Cossetti, Cristina
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Phelps, Doris
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Perrone, Clara
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Pezzella, Michele
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Wachtel, Marco
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Aloisi, Sara
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Milewski, David
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Colletti, Marta
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Sreenivas, Prethish
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Di Giannatale, Angela
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Carlesso, Nadia
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Yohe, Marielle
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Ignatius, Myron
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Houghton, Peter J.
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Marampon, Francesco
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Gryder, Berkley E.
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De Angelis, Biagio
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Locatelli, Franco
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Pomella, Silvia, Cassandri, Matteo, D'Archivio, Lucrezia, Porrazzo, Antonella, Cossetti, Cristina, Phelps, Doris, Perrone, Clara, Pezzella, Michele, Cardinale, Antonella, Wachtel, Marco, Aloisi, Sara, Milewski, David, Colletti, Marta, Sreenivas, Prethish, Walters, Zoë S., Barillari, Giovanni, Di Giannatale, Angela, Milano, Giuseppe Maria, De Stefanis, Cristiano, Alaggio, Rita, Rodriguez-Rodriguez, Sonia, Carlesso, Nadia, Vakoc, Christopher R., Velardi, Enrico, Schafer, Beat W., Guccione, Ernesto, Gatz, Susanne A., Wasti, Ajla, Yohe, Marielle, Ignatius, Myron, Quintarelli, Concetta, Shipley, Janet, Miele, Lucio, Khan, Javed, Houghton, Peter J., Marampon, Francesco, Gryder, Berkley E., De Angelis, Biagio, Locatelli, Franco and Rota, Rossella
(2023)
MYOD-SKP2 axis boosts tumorigenesis in fusion negative rhabdomyosarcoma by preventing differentiation through p57Kip2 targeting.
Nature Communications, 14 (1), [8373].
(doi:10.1038/s41467-023-44130-0).
Abstract
Rhabdomyosarcomas (RMS) are pediatric mesenchymal-derived malignancies encompassing PAX3/7-FOXO1 Fusion Positive (FP)-RMS, and Fusion Negative (FN)-RMS with frequent RAS pathway mutations. RMS express the master myogenic transcription factor MYOD that, whilst essential for survival, cannot support differentiation. Here we discover SKP2, an oncogenic E3-ubiquitin ligase, as a critical pro-tumorigenic driver in FN-RMS. We show that SKP2 is overexpressed in RMS through the binding of MYOD to an intronic enhancer. SKP2 in FN-RMS promotes cell cycle progression and prevents differentiation by directly targeting p27Kip1 and p57Kip2, respectively. SKP2 depletion unlocks a partly MYOD-dependent myogenic transcriptional program and strongly affects stemness and tumorigenic features and prevents in vivo tumor growth. These effects are mirrored by the investigational NEDDylation inhibitor MLN4924. Results demonstrate a crucial crosstalk between transcriptional and post-translational mechanisms through the MYOD-SKP2 axis that contributes to tumorigenesis in FN-RMS. Finally, NEDDylation inhibition is identified as a potential therapeutic vulnerability in FN-RMS.
Text
s41467-023-44130-0
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Published date: 15 December 2023
Additional Information:
Funding Information:
We would like to thank Maharshi Chakraborty, Richard Sallari (Axiotl Inc, Cleveland OH, USA) and Heike Wollmann (Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR), Singapore), for technical and bioinformatics assistance. The Myogenin (Wright WE) and MHC (Fishman DA) antibodies were obtained from the Developmental Studies Hybridoma Bank, developed under the auspices of the NICHD and maintained by The University of Iowa, Department of Biology, Iowa City, IA 52242, USA. C.P. was supported by the Italian Ministry of University and Research (MIUR) Ph.D. fellowship (Department of Science, Roma Tre University Doctorate). We are very grateful to M. Dyer and E. Stewart from the Childhood Solid Tumor Network (CSTN) at St. Jude for PDX models used in this study. M.Co. was supported by a “Fondazione Veronesi” fellowship. This project has been funded by Associazione Italiana Ricerca sul Cancro (AIRC IG #10338, #15312 and #27794), Alleanza Contro il Cancro (ACC) Italian Network-Working Group Sarcomas, and Italian Ministry of Health Fondi 5xmille (2020-2021) and Current Research to R.R.; Alleanza Contro il Cancro (ACC) Italian Network-Working Group Sarcomas and Italian Ministry of Health Ricerca Finalizzata GR-2016-02364546 to B.D.A.; Italian Ministry of Health Ricerca Finalizzata GR-2013 02359212 to C.Q.; AIRC MFGA #22889 to E.V.; AIRC IG #24696 to F.M.; AIRC 5xmille (9962) to F.L. B.E.G. is supported through the DOD’s Convergent Science Virtual Cancer Center, Reign in Sarcoma, the V Foundation and Alex’s Lemonade Stand Foundation. The funders had no role in study design, data collection and analysis, decision to publish or preparation of the manuscript.
Funding Information:
We would like to thank Maharshi Chakraborty, Richard Sallari (Axiotl Inc, Cleveland OH, USA) and Heike Wollmann (Institute of Molecular and Cell Biology (IMCB), Agency for Science, Technology and Research (A*STAR), Singapore), for technical and bioinformatics assistance. The Myogenin (Wright WE) and MHC (Fishman DA) antibodies were obtained from the Developmental Studies Hybridoma Bank, developed under the auspices of the NICHD and maintained by The University of Iowa, Department of Biology, Iowa City, IA 52242, USA. C.P. was supported by the Italian Ministry of University and Research (MIUR) Ph.D. fellowship (Department of Science, Roma Tre University Doctorate). We are very grateful to M. Dyer and E. Stewart from the Childhood Solid Tumor Network (CSTN) at St. Jude for PDX models used in this study. M.Co. was supported by a “Fondazione Veronesi” fellowship. This project has been funded by Associazione Italiana Ricerca sul Cancro (AIRC IG #10338, #15312 and #27794), Alleanza Contro il Cancro (ACC) Italian Network-Working Group Sarcomas, and Italian Ministry of Health Fondi 5xmille (2020-2021) and Current Research to R.R.; Alleanza Contro il Cancro (ACC) Italian Network-Working Group Sarcomas and Italian Ministry of Health Ricerca Finalizzata GR-2016-02364546 to B.D.A.; Italian Ministry of Health Ricerca Finalizzata GR-2013 02359212 to C.Q.; AIRC MFGA #22889 to E.V.; AIRC IG #24696 to F.M.; AIRC 5xmille (9962) to F.L. B.E.G. is supported through the DOD’s Convergent Science Virtual Cancer Center, Reign in Sarcoma, the V Foundation and Alex’s Lemonade Stand Foundation. The funders had no role in study design, data collection and analysis, decision to publish or preparation of the manuscript.
Publisher Copyright:
© 2023, The Author(s).
Keywords:
Carcinogenesis/genetics, Cell Line, Tumor, Child, Humans, Rhabdomyosarcoma/genetics, Transcription Factors
Identifiers
Local EPrints ID: 485866
URI: http://eprints.soton.ac.uk/id/eprint/485866
ISSN: 2041-1723
PURE UUID: bed05144-be8e-4d2d-a614-c14aaf3dd5aa
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Date deposited: 03 Jan 2024 17:03
Last modified: 06 Jun 2024 02:00
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Contributors
Author:
Silvia Pomella
Author:
Matteo Cassandri
Author:
Lucrezia D'Archivio
Author:
Antonella Porrazzo
Author:
Cristina Cossetti
Author:
Doris Phelps
Author:
Clara Perrone
Author:
Michele Pezzella
Author:
Antonella Cardinale
Author:
Marco Wachtel
Author:
Sara Aloisi
Author:
David Milewski
Author:
Marta Colletti
Author:
Prethish Sreenivas
Author:
Giovanni Barillari
Author:
Angela Di Giannatale
Author:
Giuseppe Maria Milano
Author:
Cristiano De Stefanis
Author:
Rita Alaggio
Author:
Sonia Rodriguez-Rodriguez
Author:
Nadia Carlesso
Author:
Christopher R. Vakoc
Author:
Enrico Velardi
Author:
Beat W. Schafer
Author:
Ernesto Guccione
Author:
Susanne A. Gatz
Author:
Ajla Wasti
Author:
Marielle Yohe
Author:
Myron Ignatius
Author:
Concetta Quintarelli
Author:
Janet Shipley
Author:
Lucio Miele
Author:
Javed Khan
Author:
Peter J. Houghton
Author:
Francesco Marampon
Author:
Berkley E. Gryder
Author:
Biagio De Angelis
Author:
Franco Locatelli
Author:
Rossella Rota
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