The University of Southampton
University of Southampton Institutional Repository

Bacillus megaterium has both a functional BluB protein required for DMB synthesis and a related flavoprotein that forms a stable radical species

Bacillus megaterium has both a functional BluB protein required for DMB synthesis and a related flavoprotein that forms a stable radical species
Bacillus megaterium has both a functional BluB protein required for DMB synthesis and a related flavoprotein that forms a stable radical species
Despite the extensive study of the biosynthesis of the complex molecule B12 (cobalamin), the mechanism by which the lower ligand 5,6-dimethylbenzimidazole (DMB) is formed has remained something of a mystery. However, recent work has identified and characterized a DMB-synthase (BluB) responsible for the oxygen-dependent, single enzyme conversion of FMN to DMB. In this work, we have identified BluB homologs from the aerobic purple, nonsulfur, photosynthetic bacterium Rhodobacter capsulatus and the aerobic soil bacterium Bacillus megaterium and have demonstrated DMB synthesis by the use of a novel complementation assay in which a B12 deficient strain, substituted with the precursor cobinamide is recovered either by the addition of DMB or by the recombinant expression of a bluB gene. The DMB-synthetic activity of the purified recombinant BluB enzymes was further confirmed in vitro by providing the enzyme with FMNH2 and oxygen and observing the formation of DMB by HPLC. The formation of a 4a-peroxyflavin intermediate, the first step in the oxygen dependent mechanism of DMB biosynthesis, is reported here and is the first intermediate in the enzyme catalysed reaction to be demonstrated experimentally to date. The identification and characterization of an FMN-binding protein found on the cobI operon of B. megaterium, CbiY, is also detailed, revealing an FMN-containing enzyme which is able to stabilize a blue flavin semiquinone upon reduction with a 1-electron donor.
1932-6203
Collins, Hannah F.
af520c35-78e5-4e14-85b4-f47cd70e3248
Biedendieck, Rebekka
03b1d4e9-762c-495e-b5d1-9f61c4f16859
Leech, Helen K.
9f060e63-0900-4490-95d6-8578637e7c52
Gray, Michael
6bc7ec2f-caa2-4f1a-b0f0-0456bc07990b
Escalante-Semerena, Jorge C.
13d023eb-5ed5-4bf3-9cce-7e6295f4092d
McLean, Kirsty J.
46146705-43d7-4295-b650-c2935ea9d6cd
Munro, Andrew W.
4b84bf85-fe62-4d34-8f0e-f5824af1126f
Rigby, Stephen E.J.
32656ae3-5d2f-4d00-b427-39979ffe8d00
Warren, Martin J.
04ed6b7d-e254-4f22-ae74-70c29383a3d5
Lawrence, Andrew D.
ce503b40-0155-486f-bb1d-26830b61b5f1
Battista, John R.
f5bf7174-2d0c-4768-bb83-ae1089af723f
et al.
Collins, Hannah F.
af520c35-78e5-4e14-85b4-f47cd70e3248
Biedendieck, Rebekka
03b1d4e9-762c-495e-b5d1-9f61c4f16859
Leech, Helen K.
9f060e63-0900-4490-95d6-8578637e7c52
Gray, Michael
6bc7ec2f-caa2-4f1a-b0f0-0456bc07990b
Escalante-Semerena, Jorge C.
13d023eb-5ed5-4bf3-9cce-7e6295f4092d
McLean, Kirsty J.
46146705-43d7-4295-b650-c2935ea9d6cd
Munro, Andrew W.
4b84bf85-fe62-4d34-8f0e-f5824af1126f
Rigby, Stephen E.J.
32656ae3-5d2f-4d00-b427-39979ffe8d00
Warren, Martin J.
04ed6b7d-e254-4f22-ae74-70c29383a3d5
Lawrence, Andrew D.
ce503b40-0155-486f-bb1d-26830b61b5f1
Battista, John R.
f5bf7174-2d0c-4768-bb83-ae1089af723f

Collins, Hannah F., Biedendieck, Rebekka and Leech, Helen K. , Battista, John R. (ed.) , et al. (2013) Bacillus megaterium has both a functional BluB protein required for DMB synthesis and a related flavoprotein that forms a stable radical species. PLoS ONE, 8 (2), [e55708]. (doi:10.1371/journal.pone.0055708).

Record type: Article

Abstract

Despite the extensive study of the biosynthesis of the complex molecule B12 (cobalamin), the mechanism by which the lower ligand 5,6-dimethylbenzimidazole (DMB) is formed has remained something of a mystery. However, recent work has identified and characterized a DMB-synthase (BluB) responsible for the oxygen-dependent, single enzyme conversion of FMN to DMB. In this work, we have identified BluB homologs from the aerobic purple, nonsulfur, photosynthetic bacterium Rhodobacter capsulatus and the aerobic soil bacterium Bacillus megaterium and have demonstrated DMB synthesis by the use of a novel complementation assay in which a B12 deficient strain, substituted with the precursor cobinamide is recovered either by the addition of DMB or by the recombinant expression of a bluB gene. The DMB-synthetic activity of the purified recombinant BluB enzymes was further confirmed in vitro by providing the enzyme with FMNH2 and oxygen and observing the formation of DMB by HPLC. The formation of a 4a-peroxyflavin intermediate, the first step in the oxygen dependent mechanism of DMB biosynthesis, is reported here and is the first intermediate in the enzyme catalysed reaction to be demonstrated experimentally to date. The identification and characterization of an FMN-binding protein found on the cobI operon of B. megaterium, CbiY, is also detailed, revealing an FMN-containing enzyme which is able to stabilize a blue flavin semiquinone upon reduction with a 1-electron donor.

Text
file (3) - Version of Record
Available under License Creative Commons Attribution.
Download (1MB)

More information

Accepted/In Press date: 29 December 2012
Published date: 14 February 2013

Identifiers

Local EPrints ID: 488475
URI: http://eprints.soton.ac.uk/id/eprint/488475
ISSN: 1932-6203
PURE UUID: 6817e8d2-66fd-4c97-8aa7-5ecb3fb71ddd
ORCID for Andrew D. Lawrence: ORCID iD orcid.org/0000-0002-5853-5409

Catalogue record

Date deposited: 22 Mar 2024 18:01
Last modified: 23 Mar 2024 03:10

Export record

Altmetrics

Contributors

Author: Hannah F. Collins
Author: Rebekka Biedendieck
Author: Helen K. Leech
Author: Michael Gray
Author: Jorge C. Escalante-Semerena
Author: Kirsty J. McLean
Author: Andrew W. Munro
Author: Stephen E.J. Rigby
Author: Martin J. Warren
Author: Andrew D. Lawrence ORCID iD
Editor: John R. Battista
Corporate Author: et al.

Download statistics

Downloads from ePrints over the past year. Other digital versions may also be available to download e.g. from the publisher's website.

View more statistics

Atom RSS 1.0 RSS 2.0

Contact ePrints Soton: eprints@soton.ac.uk

ePrints Soton supports OAI 2.0 with a base URL of http://eprints.soton.ac.uk/cgi/oai2

This repository has been built using EPrints software, developed at the University of Southampton, but available to everyone to use.

We use cookies to ensure that we give you the best experience on our website. If you continue without changing your settings, we will assume that you are happy to receive cookies on the University of Southampton website.

×