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Feature extraction using extrema sampling of discrete derivatives for spike sorting in implantable upper-limb neural prostheses

Feature extraction using extrema sampling of discrete derivatives for spike sorting in implantable upper-limb neural prostheses
Feature extraction using extrema sampling of discrete derivatives for spike sorting in implantable upper-limb neural prostheses

Next generation neural interfaces for upper-limb (and other) prostheses aim to develop implantable interfaces for one or more nerves, each interface having many neural signal channels that work reliably in the stump without harming the nerves. To achieve real-time multi-channel processing it is important to integrate spike sorting on-chip to overcome limitations in transmission bandwidth. This requires computationally efficient algorithms for feature extraction and clustering suitable for low-power hardware implementation. This paper describes a new feature extraction method for real-time spike sorting based on extrema analysis (namely positive peaks and negative peaks) of spike shapes and their discrete derivatives at different frequency bands. Employing simulation across different datasets, the accuracy and computational complexity of the proposed method are assessed and compared with other methods. The average classification accuracy of the proposed method in conjunction with online sorting (O-Sort) is 91.6%, outperforming all the other methods tested with the O-Sort clustering algorithm. The proposed method offers a better tradeoff between classification error and computational complexity, making it a particularly strong choice for on-chip spike sorting.

Discrete derivatives, extrema sampling, feature extraction, implantable neural interface, neural recording, online sorting, spike sorting
1534-4320
716-726
Zamani, Majid
431788cc-0702-4fa9-9709-f5777a2d0d25
Demosthenous, Andreas
bed19531-d770-4f48-8464-59d225ddea8d
Zamani, Majid
431788cc-0702-4fa9-9709-f5777a2d0d25
Demosthenous, Andreas
bed19531-d770-4f48-8464-59d225ddea8d

Zamani, Majid and Demosthenous, Andreas (2014) Feature extraction using extrema sampling of discrete derivatives for spike sorting in implantable upper-limb neural prostheses. IEEE Transactions on Neural Systems and Rehabilitation Engineering, 22 (4), 716-726. (doi:10.1109/TNSRE.2014.2309678).

Record type: Article

Abstract

Next generation neural interfaces for upper-limb (and other) prostheses aim to develop implantable interfaces for one or more nerves, each interface having many neural signal channels that work reliably in the stump without harming the nerves. To achieve real-time multi-channel processing it is important to integrate spike sorting on-chip to overcome limitations in transmission bandwidth. This requires computationally efficient algorithms for feature extraction and clustering suitable for low-power hardware implementation. This paper describes a new feature extraction method for real-time spike sorting based on extrema analysis (namely positive peaks and negative peaks) of spike shapes and their discrete derivatives at different frequency bands. Employing simulation across different datasets, the accuracy and computational complexity of the proposed method are assessed and compared with other methods. The average classification accuracy of the proposed method in conjunction with online sorting (O-Sort) is 91.6%, outperforming all the other methods tested with the O-Sort clustering algorithm. The proposed method offers a better tradeoff between classification error and computational complexity, making it a particularly strong choice for on-chip spike sorting.

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Feature_Extraction_Using_Extrema_Sampling_of_Discrete_Derivatives_for_Spike_Sorting_in_Implantable_Upper-Limb_Neural_Prostheses - Version of Record
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e-pub ahead of print date: 5 March 2014
Keywords: Discrete derivatives, extrema sampling, feature extraction, implantable neural interface, neural recording, online sorting, spike sorting

Identifiers

Local EPrints ID: 489256
URI: http://eprints.soton.ac.uk/id/eprint/489256
ISSN: 1534-4320
PURE UUID: 2a30c157-e82f-4d46-a270-d28452dd2af1
ORCID for Majid Zamani: ORCID iD orcid.org/0009-0007-0844-473X

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Date deposited: 18 Apr 2024 16:47
Last modified: 06 Jun 2024 02:19

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Contributors

Author: Majid Zamani ORCID iD
Author: Andreas Demosthenous

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