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From potential prebiotic synthons to useful chiral scaffolds: a synthetic and structural reinvestigation of 2-amino-aldononitriles

From potential prebiotic synthons to useful chiral scaffolds: a synthetic and structural reinvestigation of 2-amino-aldononitriles
From potential prebiotic synthons to useful chiral scaffolds: a synthetic and structural reinvestigation of 2-amino-aldononitriles

This paper explores and revisits in detail the formation and characterization of sugar-based aminonitriles, whose ultimate origin can be traced to the interaction of biomolecules with cyanide. Although the synthesis and spectroscopic data of 2-amino-aldononitriles were reported long ago, there are both contradictory and confusing results among the published data. We have now addressed this concern through an exhaustive structural elucidation of acylated 2-amino- and 2-alkyl(aryl)amino-2-deoxyaldonitriles using mass spectrometry and FT-IR, FT–Raman, and NMR spectroscopies. Several structures could be unambiguously determined through single-crystal X-ray diffraction, which allowed us to correct other misassignments. Moreover, this study unveils how steric and electronic effects influence the acylation outcome of the amino, (alkyl, aryl)amino, or acetamido group at C-2. The chirality at the latter, which was assigned tentatively through optical rotation correlation, and hence the preferential threo stereochemistry generated during the cyanohydrin synthesis of 2-amino-2-deoxy aldononitriles have now been established with confidence.

aldononitrile, aminosugars, chirality, spectroscopic characterization, X-ray crystallography
1420-3049
Matamoros, Esther
67ecaf15-3e62-46d8-b8fd-717f8e8c439a
Light, Mark E.
cf57314e-6856-491b-a8d2-2dffc452e161
Cintas, Pedro
29979233-8382-47a8-bde7-1faf4869308c
Palacios, Juan C.
2c06e379-89b3-46b1-95c8-7f5057732f9f
Matamoros, Esther
67ecaf15-3e62-46d8-b8fd-717f8e8c439a
Light, Mark E.
cf57314e-6856-491b-a8d2-2dffc452e161
Cintas, Pedro
29979233-8382-47a8-bde7-1faf4869308c
Palacios, Juan C.
2c06e379-89b3-46b1-95c8-7f5057732f9f

Matamoros, Esther, Light, Mark E., Cintas, Pedro and Palacios, Juan C. (2024) From potential prebiotic synthons to useful chiral scaffolds: a synthetic and structural reinvestigation of 2-amino-aldononitriles. Molecules, 29 (8), [1796]. (doi:10.3390/molecules29081796).

Record type: Article

Abstract

This paper explores and revisits in detail the formation and characterization of sugar-based aminonitriles, whose ultimate origin can be traced to the interaction of biomolecules with cyanide. Although the synthesis and spectroscopic data of 2-amino-aldononitriles were reported long ago, there are both contradictory and confusing results among the published data. We have now addressed this concern through an exhaustive structural elucidation of acylated 2-amino- and 2-alkyl(aryl)amino-2-deoxyaldonitriles using mass spectrometry and FT-IR, FT–Raman, and NMR spectroscopies. Several structures could be unambiguously determined through single-crystal X-ray diffraction, which allowed us to correct other misassignments. Moreover, this study unveils how steric and electronic effects influence the acylation outcome of the amino, (alkyl, aryl)amino, or acetamido group at C-2. The chirality at the latter, which was assigned tentatively through optical rotation correlation, and hence the preferential threo stereochemistry generated during the cyanohydrin synthesis of 2-amino-2-deoxy aldononitriles have now been established with confidence.

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Accepted/In Press date: 11 April 2024
Published date: 15 April 2024
Keywords: aldononitrile, aminosugars, chirality, spectroscopic characterization, X-ray crystallography

Identifiers

Local EPrints ID: 491137
URI: http://eprints.soton.ac.uk/id/eprint/491137
ISSN: 1420-3049
PURE UUID: 2963c416-7287-4135-939e-2daa0806d4cd
ORCID for Mark E. Light: ORCID iD orcid.org/0000-0002-0585-0843

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Date deposited: 13 Jun 2024 16:39
Last modified: 14 Jun 2024 01:36

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Contributors

Author: Esther Matamoros
Author: Mark E. Light ORCID iD
Author: Pedro Cintas
Author: Juan C. Palacios

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