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Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs

Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs
Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs
Tumor-suppressor let-7 pre-microRNAs (miRNAs) are regulated by terminal uridylyltransferases TUT7 and TUT4 that either promote let-7 maturation by adding a single uridine nucleotide to the pre-miRNA 3′ end or mark them for degradation by the addition of multiple uridines. Oligo-uridylation is increased in cells by enhanced TUT7/4 expression and especially by the RNA-binding pluripotency factor LIN28A. Using cryogenic electron microscopy, we captured high-resolution structures of active forms of TUT7 alone, of TUT7 plus pre-miRNA and of both TUT7 and TUT4 bound with pre-miRNA and LIN28A. Our structures reveal that pre-miRNAs engage the enzymes in fundamentally different ways depending on the presence of LIN28A, which clamps them onto the TUTs to enable processive 3′ oligo-uridylation. This study reveals the molecular basis for mono- versus oligo-uridylation by TUT7/4, as determined by the presence of LIN28A, and thus their mechanism of action in the regulation of cell fate and in cancer.
1545-9993
1426-1438
Yi, Gangshun
7bf155f9-49bb-42d1-aa9e-6f76101cd981
Ye, Mingda
722bf6b5-8ccb-44b0-816b-b3f61265071d
Carrique, Loic
5fa00f80-cba4-4529-b217-e23996b7f956
El-Sagheer, Afaf
05b8295a-64ad-4fdf-ad57-c34934a46c04
Brown, Tom
a64aae36-bb30-42df-88a2-11be394e8c89
Norbury, Chris J.
c464731e-bf61-4477-8773-0779c0e52bb0
Zhang, Peijun
e5f91798-0cda-412c-bb1c-0eec8cbb5387
Gilbert, Robert J.C.
5afb2335-8de2-4587-b2af-5af1d533f3a6
Yi, Gangshun
7bf155f9-49bb-42d1-aa9e-6f76101cd981
Ye, Mingda
722bf6b5-8ccb-44b0-816b-b3f61265071d
Carrique, Loic
5fa00f80-cba4-4529-b217-e23996b7f956
El-Sagheer, Afaf
05b8295a-64ad-4fdf-ad57-c34934a46c04
Brown, Tom
a64aae36-bb30-42df-88a2-11be394e8c89
Norbury, Chris J.
c464731e-bf61-4477-8773-0779c0e52bb0
Zhang, Peijun
e5f91798-0cda-412c-bb1c-0eec8cbb5387
Gilbert, Robert J.C.
5afb2335-8de2-4587-b2af-5af1d533f3a6

Yi, Gangshun, Ye, Mingda, Carrique, Loic, El-Sagheer, Afaf, Brown, Tom, Norbury, Chris J., Zhang, Peijun and Gilbert, Robert J.C. (2024) Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs. Nature Structural & Molecular Biology, 31 (9), 1426-1438. (doi:10.1038/s41594-024-01357-9).

Record type: Article

Abstract

Tumor-suppressor let-7 pre-microRNAs (miRNAs) are regulated by terminal uridylyltransferases TUT7 and TUT4 that either promote let-7 maturation by adding a single uridine nucleotide to the pre-miRNA 3′ end or mark them for degradation by the addition of multiple uridines. Oligo-uridylation is increased in cells by enhanced TUT7/4 expression and especially by the RNA-binding pluripotency factor LIN28A. Using cryogenic electron microscopy, we captured high-resolution structures of active forms of TUT7 alone, of TUT7 plus pre-miRNA and of both TUT7 and TUT4 bound with pre-miRNA and LIN28A. Our structures reveal that pre-miRNAs engage the enzymes in fundamentally different ways depending on the presence of LIN28A, which clamps them onto the TUTs to enable processive 3′ oligo-uridylation. This study reveals the molecular basis for mono- versus oligo-uridylation by TUT7/4, as determined by the presence of LIN28A, and thus their mechanism of action in the regulation of cell fate and in cancer.

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Accepted/In Press date: 17 June 2024
Published date: 25 July 2024

Identifiers

Local EPrints ID: 493180
URI: http://eprints.soton.ac.uk/id/eprint/493180
ISSN: 1545-9993
PURE UUID: 01f101b0-f404-4bd5-988e-7c06176d80bf
ORCID for Afaf El-Sagheer: ORCID iD orcid.org/0000-0001-8706-1292

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Date deposited: 27 Aug 2024 16:48
Last modified: 21 Sep 2024 01:41

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Contributors

Author: Gangshun Yi
Author: Mingda Ye
Author: Loic Carrique
Author: Afaf El-Sagheer ORCID iD
Author: Tom Brown
Author: Chris J. Norbury
Author: Peijun Zhang
Author: Robert J.C. Gilbert

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