Forecasting disease progression with parallel hyperplanes in longitudinal retinal OCT
Forecasting disease progression with parallel hyperplanes in longitudinal retinal OCT
Predicting future disease progression risk from medical images is challenging due to patient heterogeneity, and subtle or unknown imaging biomarkers. Moreover, deep learning (DL) methods for survival analysis are susceptible to image domain shifts across scanners. We tackle these issues in the task of predicting late dry Age-related Macular Degeneration (dAMD) onset from retinal OCT scans. We propose a novel DL method for survival prediction to jointly predict from the current scan a risk score, inversely related to time-to-conversion, and the probability of conversion within a time interval t. It uses a family of parallel hyperplanes generated by parameterizing the bias term as a function of t. In addition, we develop unsupervised losses based on intra-subject image pairs to ensure that risk scores increase over time and that future conversion predictions are consistent with AMD stage prediction using actual scans of future visits. Such losses enable data-efficient fine-tuning of the trained model on new unlabeled datasets acquired with a different scanner. Extensive evaluation on two large datasets acquired with different scanners resulted in a mean AUROCs of 0.82 for Dataset-1 and 0.83 for Dataset-2, across prediction intervals of 6,12 and 24 months.
273-283
Chakravarty, Arunava
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Emre, Taha
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Lachinov, Dmitrii
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Rivail, Antoine
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Scholl, Hendrik
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Fritsche, Lars
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Sivaprasad, Sobha
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Rueckert, Daniel
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Lotery, Andrew
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Schmidt-Erfurth, Ursula
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Bogunovic, Hrvoje
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4 October 2024
Chakravarty, Arunava
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Emre, Taha
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Lachinov, Dmitrii
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Rivail, Antoine
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Scholl, Hendrik
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Fritsche, Lars
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Sivaprasad, Sobha
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Rueckert, Daniel
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Lotery, Andrew
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Schmidt-Erfurth, Ursula
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Bogunovic, Hrvoje
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Chakravarty, Arunava, Emre, Taha, Lachinov, Dmitrii, Rivail, Antoine, Scholl, Hendrik, Fritsche, Lars, Sivaprasad, Sobha, Rueckert, Daniel, Lotery, Andrew, Schmidt-Erfurth, Ursula and Bogunovic, Hrvoje
(2024)
Forecasting disease progression with parallel hyperplanes in longitudinal retinal OCT.
Linguraru, M.G., Dou, Q., Feragen, A., Giannarou, S., Glocker, B., Lekadir, K. and Schnabel, Julia A.
(eds.)
In Medical Image Computing and Computer Assisted Intervention – MICCAI 2024.
vol. 15005,
Springer Cham.
.
(doi:10.1007/978-3-031-72086-4_26).
Record type:
Conference or Workshop Item
(Paper)
Abstract
Predicting future disease progression risk from medical images is challenging due to patient heterogeneity, and subtle or unknown imaging biomarkers. Moreover, deep learning (DL) methods for survival analysis are susceptible to image domain shifts across scanners. We tackle these issues in the task of predicting late dry Age-related Macular Degeneration (dAMD) onset from retinal OCT scans. We propose a novel DL method for survival prediction to jointly predict from the current scan a risk score, inversely related to time-to-conversion, and the probability of conversion within a time interval t. It uses a family of parallel hyperplanes generated by parameterizing the bias term as a function of t. In addition, we develop unsupervised losses based on intra-subject image pairs to ensure that risk scores increase over time and that future conversion predictions are consistent with AMD stage prediction using actual scans of future visits. Such losses enable data-efficient fine-tuning of the trained model on new unlabeled datasets acquired with a different scanner. Extensive evaluation on two large datasets acquired with different scanners resulted in a mean AUROCs of 0.82 for Dataset-1 and 0.83 for Dataset-2, across prediction intervals of 6,12 and 24 months.
Text
FORECASTING DISEASE PROGRESSION WITH PARALLEL
- Accepted Manuscript
Restricted to Repository staff only until 4 October 2025.
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e-pub ahead of print date: 4 October 2024
Published date: 4 October 2024
Venue - Dates:
27th Medical Image Computing and Computer Assisted Intervention 2024 MICCAI, Morocco, 2024-10-06 - 2024-10-10
Identifiers
Local EPrints ID: 496320
URI: http://eprints.soton.ac.uk/id/eprint/496320
PURE UUID: d7b1a60b-05f9-4ebc-8937-9825dcd41419
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Date deposited: 11 Dec 2024 18:04
Last modified: 08 Apr 2025 01:38
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Contributors
Author:
Arunava Chakravarty
Author:
Taha Emre
Author:
Dmitrii Lachinov
Author:
Antoine Rivail
Author:
Hendrik Scholl
Author:
Lars Fritsche
Author:
Sobha Sivaprasad
Author:
Daniel Rueckert
Author:
Ursula Schmidt-Erfurth
Author:
Hrvoje Bogunovic
Editor:
M.G. Linguraru
Editor:
Q. Dou
Editor:
A. Feragen
Editor:
S. Giannarou
Editor:
B. Glocker
Editor:
K. Lekadir
Editor:
Julia A. Schnabel
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