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Lynch syndrome diagnostic testing pathways in endometrial cancers: a nationwide English registry-based study

Lynch syndrome diagnostic testing pathways in endometrial cancers: a nationwide English registry-based study
Lynch syndrome diagnostic testing pathways in endometrial cancers: a nationwide English registry-based study

Background: for female patients with Lynch syndrome (LS), endometrial cancer (EC) is often their first cancer diagnosis. A testing pathway of somatic tumour testing triage followed by germline mismatch repair (MMR) gene testing is an effective way of identifying the estimated 3% of EC caused by LS. 

Methods: a retrospective national population-based observational study was conducted using comprehensive national data collections of functional, somatic and germline MMR tests available via the English National Cancer Registration Dataset. For all EC diagnosed in 2019, the proportion tested, median time to test, yield of abnormal results and factors influencing testing pathway initiation were examined. 

Results: there was an immunohistochemistry (IHC) or microsatellite instability (MSI) test recorded for 17.8% (1408/7928) of patients diagnosed with EC in 2019. Proportions tested varied by Cancer Alliance and age. There was an MLH1 promoter hypermethylation test recorded for 43.1% (149/346) of patients with MLH1 protein IHC loss or MSI. Of patients with EC eligible from tumour-testing, 25% (26/104) had a germline MMR test recorded. Median time from cancer diagnosis to germline MMR test was 315 days (IQR 222-486). 

Conclusion: this analysis highlights the regional variation in recorded testing, patient attrition, delays and missed opportunities to diagnose LS, providing an informative baseline for measuring the impact of the national guidance from the National Institute for Health and Care Excellence on universal reflex LS testing in EC, implemented in 2020.

databases, genetic, genetic predisposition to disease, genetic testing, gynecology, health services research
0022-2593
Loong, Lucy
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Huntley, Catherine
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Pethick, Joanna
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McRonald, Fiona
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Santaniello, Francesco
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Shand, Brian
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Tulloch, Oliver
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Goel, Shilpi
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Lüchtenborg, Margreet
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Allen, Sophie
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Torr, Bethany
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Snape, Katie
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George, Angela
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Lalloo, Fiona
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Norbury, Gail
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Eccles, Diana M.
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Tischkowitz, Marc
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Antoniou, Antonis C.
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Pharoah, Paul
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Shaw, Adam
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Morris, Eva
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Burn, John
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Monahan, Kevin
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Hardy, Steven
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Turnbull, Clare
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Loong, Lucy
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Huntley, Catherine
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Pethick, Joanna
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McRonald, Fiona
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Santaniello, Francesco
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Shand, Brian
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Tulloch, Oliver
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Goel, Shilpi
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Lüchtenborg, Margreet
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Allen, Sophie
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Torr, Bethany
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Snape, Katie
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George, Angela
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Lalloo, Fiona
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Norbury, Gail
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Eccles, Diana M.
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Tischkowitz, Marc
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Antoniou, Antonis C.
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Pharoah, Paul
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Shaw, Adam
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Morris, Eva
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Burn, John
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Monahan, Kevin
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Hardy, Steven
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Turnbull, Clare
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Loong, Lucy, Huntley, Catherine, Pethick, Joanna, McRonald, Fiona, Santaniello, Francesco, Shand, Brian, Tulloch, Oliver, Goel, Shilpi, Lüchtenborg, Margreet, Allen, Sophie, Torr, Bethany, Snape, Katie, George, Angela, Lalloo, Fiona, Norbury, Gail, Eccles, Diana M., Tischkowitz, Marc, Antoniou, Antonis C., Pharoah, Paul, Shaw, Adam, Morris, Eva, Burn, John, Monahan, Kevin, Hardy, Steven and Turnbull, Clare (2024) Lynch syndrome diagnostic testing pathways in endometrial cancers: a nationwide English registry-based study. Journal of Medical Genetics, 61 (12). (doi:10.1136/jmg-2024-110231).

Record type: Article

Abstract

Background: for female patients with Lynch syndrome (LS), endometrial cancer (EC) is often their first cancer diagnosis. A testing pathway of somatic tumour testing triage followed by germline mismatch repair (MMR) gene testing is an effective way of identifying the estimated 3% of EC caused by LS. 

Methods: a retrospective national population-based observational study was conducted using comprehensive national data collections of functional, somatic and germline MMR tests available via the English National Cancer Registration Dataset. For all EC diagnosed in 2019, the proportion tested, median time to test, yield of abnormal results and factors influencing testing pathway initiation were examined. 

Results: there was an immunohistochemistry (IHC) or microsatellite instability (MSI) test recorded for 17.8% (1408/7928) of patients diagnosed with EC in 2019. Proportions tested varied by Cancer Alliance and age. There was an MLH1 promoter hypermethylation test recorded for 43.1% (149/346) of patients with MLH1 protein IHC loss or MSI. Of patients with EC eligible from tumour-testing, 25% (26/104) had a germline MMR test recorded. Median time from cancer diagnosis to germline MMR test was 315 days (IQR 222-486). 

Conclusion: this analysis highlights the regional variation in recorded testing, patient attrition, delays and missed opportunities to diagnose LS, providing an informative baseline for measuring the impact of the national guidance from the National Institute for Health and Care Excellence on universal reflex LS testing in EC, implemented in 2020.

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Accepted/In Press date: 18 September 2024
e-pub ahead of print date: 21 October 2024
Published date: 25 November 2024
Additional Information: Publisher Copyright: © Author(s) (or their employer(s)) 2024.
Keywords: databases, genetic, genetic predisposition to disease, genetic testing, gynecology, health services research

Identifiers

Local EPrints ID: 497734
URI: http://eprints.soton.ac.uk/id/eprint/497734
ISSN: 0022-2593
PURE UUID: 28efa4c0-1e70-43da-bbb6-969d5a67d261
ORCID for Diana M. Eccles: ORCID iD orcid.org/0000-0002-9935-3169

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Date deposited: 30 Jan 2025 17:43
Last modified: 22 Aug 2025 01:35

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Contributors

Author: Lucy Loong
Author: Catherine Huntley
Author: Joanna Pethick
Author: Fiona McRonald
Author: Francesco Santaniello
Author: Brian Shand
Author: Oliver Tulloch
Author: Shilpi Goel
Author: Margreet Lüchtenborg
Author: Sophie Allen
Author: Bethany Torr
Author: Katie Snape
Author: Angela George
Author: Fiona Lalloo
Author: Gail Norbury
Author: Diana M. Eccles ORCID iD
Author: Marc Tischkowitz
Author: Antonis C. Antoniou
Author: Paul Pharoah
Author: Adam Shaw
Author: Eva Morris
Author: John Burn
Author: Kevin Monahan
Author: Steven Hardy
Author: Clare Turnbull

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