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Large-scale phenotyping of patients with long COVID post-hospitalization reveals mechanistic subtypes of disease

Large-scale phenotyping of patients with long COVID post-hospitalization reveals mechanistic subtypes of disease
Large-scale phenotyping of patients with long COVID post-hospitalization reveals mechanistic subtypes of disease

One in ten severe acute respiratory syndrome coronavirus 2 infections result in prolonged symptoms termed long coronavirus disease (COVID), yet disease phenotypes and mechanisms are poorly understood1. Here we profiled 368 plasma proteins in 657 participants ≥3 months following hospitalization. Of these, 426 had at least one long COVID symptom and 233 had fully recovered. Elevated markers of myeloid inflammation and complement activation were associated with long COVID. IL-1R2, MATN2 and COLEC12 were associated with cardiorespiratory symptoms, fatigue and anxiety/depression; MATN2, CSF3 and C1QA were elevated in gastrointestinal symptoms and C1QA was elevated in cognitive impairment. Additional markers of alterations in nerve tissue repair (SPON-1 and NFASC) were elevated in those with cognitive impairment and SCG3, suggestive of brain-gut axis disturbance, was elevated in gastrointestinal symptoms. Severe acute respiratory syndrome coronavirus 2-specific immunoglobulin G (IgG) was persistently elevated in some individuals with long COVID, but virus was not detected in sputum. Analysis of inflammatory markers in nasal fluids showed no association with symptoms. Our study aimed to understand inflammatory processes that underlie long COVID and was not designed for biomarker discovery. Our findings suggest that specific inflammatory pathways related to tissue damage are implicated in subtypes of long COVID, which might be targeted in future therapeutic trials.

Biomedical Research, COVID-19, Hospitalization, Humans, Immunoglobulin G, Post-Acute COVID-19 Syndrome
1529-2908
607-621
Liew, F
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Efstathiou, Claudia
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Fontanella, S
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Saunders, R
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Swieboda, D
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JK, Sidhu
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Ascough, S
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Moore, Shona C
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Nunag, Jose Maria
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Elneima, O
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Shikotra, A
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Houchen-Wolloff, Linzy
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Greening, Neil
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Lone, Nazir I
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Thorpe, M
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Thompson, Roger
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SL, Rowland-Jones
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Docherty, Annemarie B
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JD, Chalmers
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Ho, Ling-Pei
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Horsley, Alex
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Raman, B
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Poinasamy, K
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Marks, M
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OM, Kon
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Howard, Luke
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DG, Wootton
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JK, Quint
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de Silva, Thushan
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Ho, A
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Jones, Mark
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Chiu, Christopher
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Harrison, Ewen
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Greenhalf, W
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Baillie, John Kenneth
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OBE, Malcolm Gracie Semple
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Turtle, L
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LV, Wain
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Brightling, C
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Thwaites, Ryan
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Openshaw, Peter JM
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PHOSP-COVID Study Collaborative Group
Liew, F
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Efstathiou, Claudia
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Fontanella, S
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Saunders, R
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Swieboda, D
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JK, Sidhu
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Ascough, S
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Moore, Shona C
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Nunag, Jose Maria
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OC, Leavy
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Elneima, O
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HJC, McAuley
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Shikotra, A
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Singapuri, Amisha
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Houchen-Wolloff, Linzy
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Greening, Neil
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Lone, Nazir I
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Thorpe, M
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Docherty, Annemarie B
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JD, Chalmers
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Ho, Ling-Pei
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Horsley, Alex
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Raman, B
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Poinasamy, K
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Marks, M
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OM, Kon
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Howard, Luke
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DG, Wootton
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JK, Quint
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de Silva, Thushan
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Ho, A
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Jones, Mark
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Chiu, Christopher
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Harrison, Ewen
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Greenhalf, W
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Baillie, John Kenneth
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OBE, Malcolm Gracie Semple
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Turtle, L
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LV, Wain
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Brightling, C
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Thwaites, Ryan
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Openshaw, Peter JM
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Jones, Mark , PHOSP-COVID Study Collaborative Group (2024) Large-scale phenotyping of patients with long COVID post-hospitalization reveals mechanistic subtypes of disease. Nature Immunology, 25 (4), 607-621. (doi:10.1038/s41590-024-01778-0).

Record type: Letter

Abstract

One in ten severe acute respiratory syndrome coronavirus 2 infections result in prolonged symptoms termed long coronavirus disease (COVID), yet disease phenotypes and mechanisms are poorly understood1. Here we profiled 368 plasma proteins in 657 participants ≥3 months following hospitalization. Of these, 426 had at least one long COVID symptom and 233 had fully recovered. Elevated markers of myeloid inflammation and complement activation were associated with long COVID. IL-1R2, MATN2 and COLEC12 were associated with cardiorespiratory symptoms, fatigue and anxiety/depression; MATN2, CSF3 and C1QA were elevated in gastrointestinal symptoms and C1QA was elevated in cognitive impairment. Additional markers of alterations in nerve tissue repair (SPON-1 and NFASC) were elevated in those with cognitive impairment and SCG3, suggestive of brain-gut axis disturbance, was elevated in gastrointestinal symptoms. Severe acute respiratory syndrome coronavirus 2-specific immunoglobulin G (IgG) was persistently elevated in some individuals with long COVID, but virus was not detected in sputum. Analysis of inflammatory markers in nasal fluids showed no association with symptoms. Our study aimed to understand inflammatory processes that underlie long COVID and was not designed for biomarker discovery. Our findings suggest that specific inflammatory pathways related to tissue damage are implicated in subtypes of long COVID, which might be targeted in future therapeutic trials.

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More information

Accepted/In Press date: 6 February 2024
Published date: 8 April 2024
Keywords: Biomedical Research, COVID-19, Hospitalization, Humans, Immunoglobulin G, Post-Acute COVID-19 Syndrome

Identifiers

Local EPrints ID: 500223
URI: http://eprints.soton.ac.uk/id/eprint/500223
ISSN: 1529-2908
PURE UUID: 689935f1-2cfd-49e2-8de4-945fd3c98b27
ORCID for Mark Jones: ORCID iD orcid.org/0000-0001-6308-6014

Catalogue record

Date deposited: 22 Apr 2025 17:14
Last modified: 23 Apr 2025 01:41

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Contributors

Author: F Liew
Author: Claudia Efstathiou
Author: S Fontanella
Author: R Saunders
Author: D Swieboda
Author: Sidhu JK
Author: S Ascough
Author: Shona C Moore
Author: Jose Maria Nunag
Author: Leavy OC
Author: O Elneima
Author: McAuley HJC
Author: A Shikotra
Author: Amisha Singapuri
Author: Marco Sereno
Author: Harris VC
Author: Linzy Houchen-Wolloff
Author: Neil Greening
Author: Nazir I Lone
Author: M Thorpe
Author: Roger Thompson
Author: Rowland-Jones SL
Author: Annemarie B Docherty
Author: Chalmers JD
Author: Ling-Pei Ho
Author: Alex Horsley
Author: B Raman
Author: K Poinasamy
Author: M Marks
Author: Kon OM
Author: Luke Howard
Author: Wootton DG
Author: Quint JK
Author: Thushan de Silva
Author: A Ho
Author: Mark Jones ORCID iD
Author: Christopher Chiu
Author: Ewen Harrison
Author: W Greenhalf
Author: John Kenneth Baillie
Author: Malcolm Gracie Semple OBE
Author: L Turtle
Author: Wain LV
Author: C Brightling
Author: Ryan Thwaites
Author: Peter JM Openshaw
Corporate Author: PHOSP-COVID Study Collaborative Group

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