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Porewater and microbial community properties of permeable riverbed sediments across the south of England, 2018

Porewater and microbial community properties of permeable riverbed sediments across the south of England, 2018
Porewater and microbial community properties of permeable riverbed sediments across the south of England, 2018
This dataset contains in-stream measurements of sediment porewater nutrients, nitrification rates (and the fraction which is either fully oxidised to nitrate or reduced to N2 gas), and the abundance of microbial 16S rRNA and specific N-cycling genes and transcripts. Sediments were sampled in winter (February 2018) and summer (July 2018), from 12 UK rivers with permeable beds (sand or chalk geology) and a gradient of P concentrations, in the Hampshire Avon catchment, Kent, and Essex. Methods included measurements of porewater nutrients using Skalar SAN++AutoAnalyser, nitrification rates from in-situ ‘push-pull’ injections of 15N-labelled ammonia and -nitrite, and sediment microbial gene and transcript abundance by DNA extraction and qPCR. The work was supported by the Natural Environment Research Council (Grants NE/P01142X/1, NE/P011624/1; A new dynamic for Phosphorus in RIverbed Nitrogen Cycling - PRINCe
15N, 16S rRNA, ammonia oxidising, nitrification, nitrogen cycle, water quality
NERC EDS Environmental Information Data Centre
Clark, David
c8d3ce1f-de2e-4e0c-8579-012c9bfc84af
Greenwood, Bethan
2f334316-7a3d-48b4-bf67-eafa29787fbd
Ma, Chun
65077771-cedd-4db9-8de0-773e61eaf5ee
Si, Yueyue
da0cbb1d-cec8-426a-b537-4c7d4e2c1ef0
Thomas, Gareth
7849d41a-766b-475b-b664-cf4ac4345383
Laissue, Pierre
faf53393-d350-4ab1-98df-23233d37ba9e
Whitby, Corinne
91268fd8-3d1a-46ce-9bd2-e3b7a5e1d5ac
McKew, Boyd
d639f0a8-d478-4a4b-bf58-b56dc8031b8d
Trimmer, Mark
c894a491-4179-4b89-91ef-0e49584d04ef
Clark, David
c8d3ce1f-de2e-4e0c-8579-012c9bfc84af
Greenwood, Bethan
2f334316-7a3d-48b4-bf67-eafa29787fbd
Ma, Chun
65077771-cedd-4db9-8de0-773e61eaf5ee
Si, Yueyue
da0cbb1d-cec8-426a-b537-4c7d4e2c1ef0
Thomas, Gareth
7849d41a-766b-475b-b664-cf4ac4345383
Laissue, Pierre
faf53393-d350-4ab1-98df-23233d37ba9e
Whitby, Corinne
91268fd8-3d1a-46ce-9bd2-e3b7a5e1d5ac
McKew, Boyd
d639f0a8-d478-4a4b-bf58-b56dc8031b8d
Trimmer, Mark
c894a491-4179-4b89-91ef-0e49584d04ef

Clark, David (2022) Porewater and microbial community properties of permeable riverbed sediments across the south of England, 2018. NERC EDS Environmental Information Data Centre doi:10.5285/d432d96c-7aff-45a5-9d4b-37e4065afdd7 [Dataset]

Record type: Dataset

Abstract

This dataset contains in-stream measurements of sediment porewater nutrients, nitrification rates (and the fraction which is either fully oxidised to nitrate or reduced to N2 gas), and the abundance of microbial 16S rRNA and specific N-cycling genes and transcripts. Sediments were sampled in winter (February 2018) and summer (July 2018), from 12 UK rivers with permeable beds (sand or chalk geology) and a gradient of P concentrations, in the Hampshire Avon catchment, Kent, and Essex. Methods included measurements of porewater nutrients using Skalar SAN++AutoAnalyser, nitrification rates from in-situ ‘push-pull’ injections of 15N-labelled ammonia and -nitrite, and sediment microbial gene and transcript abundance by DNA extraction and qPCR. The work was supported by the Natural Environment Research Council (Grants NE/P01142X/1, NE/P011624/1; A new dynamic for Phosphorus in RIverbed Nitrogen Cycling - PRINCe

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More information

Published date: 8 February 2022
Keywords: 15N, 16S rRNA, ammonia oxidising, nitrification, nitrogen cycle, water quality

Identifiers

Local EPrints ID: 500234
URI: http://eprints.soton.ac.uk/id/eprint/500234
PURE UUID: dab64ae7-fcb6-472b-a379-7abb947dedca
ORCID for Yueyue Si: ORCID iD orcid.org/0000-0001-6016-0530

Catalogue record

Date deposited: 22 Apr 2025 17:16
Last modified: 23 Apr 2025 02:08

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Contributors

Creator: David Clark
Contributor: Bethan Greenwood
Contributor: Chun Ma
Contributor: Yueyue Si ORCID iD
Contributor: Gareth Thomas
Contributor: Pierre Laissue
Contributor: Corinne Whitby
Contributor: Boyd McKew
Contributor: Mark Trimmer

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