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NALCN/Cch1 channelosome subunits originated in early eukaryotes and are fully conserved in animals, fungi, and apusomonads

NALCN/Cch1 channelosome subunits originated in early eukaryotes and are fully conserved in animals, fungi, and apusomonads
NALCN/Cch1 channelosome subunits originated in early eukaryotes and are fully conserved in animals, fungi, and apusomonads
The sodium leak channel NALCN, a key regulator of neuronal excitability, associates with three ancillary subunits that are critical for its function: an extracellular subunit called FAM155, and two cytoplasmic subunits called UNC79 and UNC80. Interestingly, NALCN and FAM155 have orthologous phylogenetic relationships with the fungal calcium channel Cch1 and its extracellular subunit Mid1, however, UNC79 and UNC80 have not been reported outside of animals. In this study, we leveraged expanded gene sequence data available for eukaryotes to re-examine the evolutionary origins of NALCN and Cch1 channel subunits. Our analysis corroborates the direct phylogenetic relationship between NALCN and Cch1 and identifies a larger clade of related channels in additional eukaryotic taxa. We also identify homologues of FAM155/Mid1 in Cryptista algae, and UNC79 and UNC80 homologues in numerous non-metazoan eukaryotes including basidiomycete and mucoromycete fungi, and the microbial eukaryotic taxa Apusomonadida, Malawimonadida, and Discoba. Furthermore, we find that most major animal lineages, except ctenophores, possess a full complement of NALCN subunits. Comparing structural predictions with the solved structure of the human NALCN complex supports orthologous relationships between metazoan and non-metazoan FAM155/Mid1, UNC79, and UNC80 homologues. Together, our analyses reveal unexpected diversity and ancient eukaryotic origins of NALCN/Cch1 channelosome subunits and raise interesting questions about the functional nature of this conserved channel complex within a broad, eukaryotic context.
bioRxiv
Senatore, Adriano
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Mayorova, Tatiana D.
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Yanez-Guerra, Luis
cbca947b-bbf0-4b91-96b0-4a126e3b94b6
Elkhatib, Wassim
e9a6a3ab-c74f-482d-9eff-3c7b2dd14466
Bejoy, Brian
f88bd063-74b1-48be-8d97-1b226540d0bf
Lory, Philippe
67de29ee-9fae-40b1-b881-679bac7381dd
Monteil, Arnaud
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Senatore, Adriano
0b2719e2-564d-4c37-abe4-6a4f82bbba31
Mayorova, Tatiana D.
834a79ba-5daf-4388-9655-045d1eaadfea
Yanez-Guerra, Luis
cbca947b-bbf0-4b91-96b0-4a126e3b94b6
Elkhatib, Wassim
e9a6a3ab-c74f-482d-9eff-3c7b2dd14466
Bejoy, Brian
f88bd063-74b1-48be-8d97-1b226540d0bf
Lory, Philippe
67de29ee-9fae-40b1-b881-679bac7381dd
Monteil, Arnaud
9dd9bff6-e8e3-4240-8f84-1631487775dc

[Unknown type: UNSPECIFIED]

Record type: UNSPECIFIED

Abstract

The sodium leak channel NALCN, a key regulator of neuronal excitability, associates with three ancillary subunits that are critical for its function: an extracellular subunit called FAM155, and two cytoplasmic subunits called UNC79 and UNC80. Interestingly, NALCN and FAM155 have orthologous phylogenetic relationships with the fungal calcium channel Cch1 and its extracellular subunit Mid1, however, UNC79 and UNC80 have not been reported outside of animals. In this study, we leveraged expanded gene sequence data available for eukaryotes to re-examine the evolutionary origins of NALCN and Cch1 channel subunits. Our analysis corroborates the direct phylogenetic relationship between NALCN and Cch1 and identifies a larger clade of related channels in additional eukaryotic taxa. We also identify homologues of FAM155/Mid1 in Cryptista algae, and UNC79 and UNC80 homologues in numerous non-metazoan eukaryotes including basidiomycete and mucoromycete fungi, and the microbial eukaryotic taxa Apusomonadida, Malawimonadida, and Discoba. Furthermore, we find that most major animal lineages, except ctenophores, possess a full complement of NALCN subunits. Comparing structural predictions with the solved structure of the human NALCN complex supports orthologous relationships between metazoan and non-metazoan FAM155/Mid1, UNC79, and UNC80 homologues. Together, our analyses reveal unexpected diversity and ancient eukaryotic origins of NALCN/Cch1 channelosome subunits and raise interesting questions about the functional nature of this conserved channel complex within a broad, eukaryotic context.

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2025.04.04.647097v1.full - Author's Original
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Published date: 10 April 2025

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Local EPrints ID: 501442
URI: http://eprints.soton.ac.uk/id/eprint/501442
PURE UUID: 38877025-82ca-4b73-a77b-e2e5494e1a53
ORCID for Luis Yanez-Guerra: ORCID iD orcid.org/0000-0002-2523-1310

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Date deposited: 02 Jun 2025 16:32
Last modified: 22 Aug 2025 02:41

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Contributors

Author: Adriano Senatore
Author: Tatiana D. Mayorova
Author: Luis Yanez-Guerra ORCID iD
Author: Wassim Elkhatib
Author: Brian Bejoy
Author: Philippe Lory
Author: Arnaud Monteil

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