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Mining higher-order triadic interactions

Mining higher-order triadic interactions
Mining higher-order triadic interactions
Complex systems often involve higher-order interactions which require us to go beyond their description in terms of pairwise networks. Triadic interactions are a fundamental type of higher-order interaction that occurs when one node regulates the interaction between two other nodes. Triadic interactions are found in a large variety of biological systems, from neuron-glia interactions to gene-regulation and ecosystems. However, triadic interactions have so far been mostly neglected. In this article, we propose a theoretical model that demonstrates that triadic interactions can modulate the mutual information between the dynamical state of two linked nodes. Leveraging this result, we propose the Triadic Interaction Mining (TRIM) algorithm to mine triadic interactions from node metadata, and we apply this framework to gene expression data, finding new candidates for triadic interactions relevant for Acute Myeloid Leukemia. Our work reveals important aspects of higher-order triadic interactions that are often ignored, yet can transform our understanding of complex systems and be applied to a large variety of systems ranging from biology to the climate.
nlin.AO, cond-mat.stat-mech, cs.SI, math-ph, math.MP, physics.soc-ph
arXiv
Niedostatek, Marta
1ef56c30-24a7-4d4c-ba1f-ea73c218d66e
Baptista, Anthony
3ca93c8d-b361-4b16-ab36-2b08df637251
Yamamoto, Jun
b8600615-d27b-44e1-a70d-6908ad6e406d
Kurths, Jurgen
33f8609e-42c6-487e-8428-3dc234dcfb4b
Garcia, Ruben Sanchez
8246cea2-ae1c-44f2-94e9-bacc9371c3ed
MacArthur, Ben
2c0476e7-5d3e-4064-81bb-104e8e88bb6b
Bianconi, Ginestra
7a0e94b4-1b00-44ec-ae1e-0130880d377a
Niedostatek, Marta
1ef56c30-24a7-4d4c-ba1f-ea73c218d66e
Baptista, Anthony
3ca93c8d-b361-4b16-ab36-2b08df637251
Yamamoto, Jun
b8600615-d27b-44e1-a70d-6908ad6e406d
Kurths, Jurgen
33f8609e-42c6-487e-8428-3dc234dcfb4b
Garcia, Ruben Sanchez
8246cea2-ae1c-44f2-94e9-bacc9371c3ed
MacArthur, Ben
2c0476e7-5d3e-4064-81bb-104e8e88bb6b
Bianconi, Ginestra
7a0e94b4-1b00-44ec-ae1e-0130880d377a

[Unknown type: UNSPECIFIED]

Record type: UNSPECIFIED

Abstract

Complex systems often involve higher-order interactions which require us to go beyond their description in terms of pairwise networks. Triadic interactions are a fundamental type of higher-order interaction that occurs when one node regulates the interaction between two other nodes. Triadic interactions are found in a large variety of biological systems, from neuron-glia interactions to gene-regulation and ecosystems. However, triadic interactions have so far been mostly neglected. In this article, we propose a theoretical model that demonstrates that triadic interactions can modulate the mutual information between the dynamical state of two linked nodes. Leveraging this result, we propose the Triadic Interaction Mining (TRIM) algorithm to mine triadic interactions from node metadata, and we apply this framework to gene expression data, finding new candidates for triadic interactions relevant for Acute Myeloid Leukemia. Our work reveals important aspects of higher-order triadic interactions that are often ignored, yet can transform our understanding of complex systems and be applied to a large variety of systems ranging from biology to the climate.

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2404.14997v3
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e-pub ahead of print date: 23 April 2024
Keywords: nlin.AO, cond-mat.stat-mech, cs.SI, math-ph, math.MP, physics.soc-ph

Identifiers

Local EPrints ID: 502023
URI: http://eprints.soton.ac.uk/id/eprint/502023
PURE UUID: acd3ac7c-fd85-425c-8e57-df4d7dccab96
ORCID for Ruben Sanchez Garcia: ORCID iD orcid.org/0000-0001-6479-3028
ORCID for Ben MacArthur: ORCID iD orcid.org/0000-0002-5396-9750

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Date deposited: 13 Jun 2025 16:59
Last modified: 14 Jun 2025 01:47

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Contributors

Author: Marta Niedostatek
Author: Anthony Baptista
Author: Jun Yamamoto
Author: Jurgen Kurths
Author: Ben MacArthur ORCID iD
Author: Ginestra Bianconi

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