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Precision targeting of human iNKT cells for cancer immunotherapy

Precision targeting of human iNKT cells for cancer immunotherapy
Precision targeting of human iNKT cells for cancer immunotherapy
Invariant natural killer T (iNKT) cells are a distinct subset of T lymphocytes that recognise lipid antigens presented by CD1d. iNKT cells have been classified into subsets based on both their TCR affinity for CD1d and coreceptor expression, such as CD4⁺ and double-negative (DN) populations, each with distinct functional properties. However, their differential roles in anti-tumour immunity remain unclear. To address this, we employed single-cell RNA sequencing to compare the gene expression and transcription factor profiles of low and high affinity iNKT cells, revealing distinct molecular signatures. TCR sequencing using Oxford Nanopore technology uncovered substantial variability,particularly within the complementarity-determining region 3 (CDR3) of both the α and βchains. Functional assays demonstrated that high affinity iNKT clones exhibit superior cytotoxicity against CD1d-expressing target cells. Additionally, we found that DN iNKT cells display greater cytotoxic potential than CD4⁺ iNKT cells, correlating with their strong expression of the activating receptor NKG2D. Blocking experiments confirmed that NKG2D mediates their enhanced tumour cell lysis. Given the importance of CD1d in iNKT cell activation, we explored strategies to enhance its expression on cancer cells. We optimised an in vitro treatment regimen combining Enhancer of Zeste Homolog 2 (EZH2) inhibitors and all-trans-retinoic acid (ATRA),demonstrating that this approach significantly increases CD1d surface expression and enhances iNKT cell-mediated lysis of acute myeloid leukaemia (AML) cells. Collectively, our findings underscore the functional and phenotypic heterogeneity of iNKT cells and their significance in cancer immunotherapy. Selectively targeting specific iNKT subsets may enhance therapeutic efficacy, while tumour micro environment modulation to upregulate CD1d could further improve direct iNKT-mediated tumour lysis. Future studies should optimise these strategies for clinical application in cancer immunotherapy.
University of Southampton
Look, Alex
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Look, Alex
5229d2c0-2e0a-4c94-8fd4-443c04d3133e
Mansour, Salah
4aecba5a-8387-4f7b-b766-0a9c309ccb8b
Roghanian, Ali
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Garay Baquero, Diana
da9136fe-3d47-4d04-8ab3-96bfe17a773c

Look, Alex (2025) Precision targeting of human iNKT cells for cancer immunotherapy. University of Southampton, Doctoral Thesis, 321pp.

Record type: Thesis (Doctoral)

Abstract

Invariant natural killer T (iNKT) cells are a distinct subset of T lymphocytes that recognise lipid antigens presented by CD1d. iNKT cells have been classified into subsets based on both their TCR affinity for CD1d and coreceptor expression, such as CD4⁺ and double-negative (DN) populations, each with distinct functional properties. However, their differential roles in anti-tumour immunity remain unclear. To address this, we employed single-cell RNA sequencing to compare the gene expression and transcription factor profiles of low and high affinity iNKT cells, revealing distinct molecular signatures. TCR sequencing using Oxford Nanopore technology uncovered substantial variability,particularly within the complementarity-determining region 3 (CDR3) of both the α and βchains. Functional assays demonstrated that high affinity iNKT clones exhibit superior cytotoxicity against CD1d-expressing target cells. Additionally, we found that DN iNKT cells display greater cytotoxic potential than CD4⁺ iNKT cells, correlating with their strong expression of the activating receptor NKG2D. Blocking experiments confirmed that NKG2D mediates their enhanced tumour cell lysis. Given the importance of CD1d in iNKT cell activation, we explored strategies to enhance its expression on cancer cells. We optimised an in vitro treatment regimen combining Enhancer of Zeste Homolog 2 (EZH2) inhibitors and all-trans-retinoic acid (ATRA),demonstrating that this approach significantly increases CD1d surface expression and enhances iNKT cell-mediated lysis of acute myeloid leukaemia (AML) cells. Collectively, our findings underscore the functional and phenotypic heterogeneity of iNKT cells and their significance in cancer immunotherapy. Selectively targeting specific iNKT subsets may enhance therapeutic efficacy, while tumour micro environment modulation to upregulate CD1d could further improve direct iNKT-mediated tumour lysis. Future studies should optimise these strategies for clinical application in cancer immunotherapy.

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More information

Published date: 2025

Identifiers

Local EPrints ID: 503612
URI: http://eprints.soton.ac.uk/id/eprint/503612
PURE UUID: 371cdde8-e21e-4887-a6d2-b240d4c10e74
ORCID for Salah Mansour: ORCID iD orcid.org/0000-0002-5982-734X
ORCID for Ali Roghanian: ORCID iD orcid.org/0000-0003-1316-4218
ORCID for Diana Garay Baquero: ORCID iD orcid.org/0000-0002-9450-8504

Catalogue record

Date deposited: 07 Aug 2025 16:33
Last modified: 26 Sep 2025 02:02

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Contributors

Author: Alex Look
Thesis advisor: Salah Mansour ORCID iD
Thesis advisor: Ali Roghanian ORCID iD
Thesis advisor: Diana Garay Baquero ORCID iD

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