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Leveraging known Pacific colonisation times to test models for the ancestry of Southeast Asians

Leveraging known Pacific colonisation times to test models for the ancestry of Southeast Asians
Leveraging known Pacific colonisation times to test models for the ancestry of Southeast Asians
The most widely accepted model for the colonization of Remote Oceania by Austronesian-speaking bearers of the Lapita complex ~ 3 ka (3000 years ago) links it to a broader Neolithic expansion from China, via Taiwan, ~ 4.5–6 ka. However, analyses of mitochondrial DNA haplogroup B4a1a1a, prevalent among Remote Oceanians today, have both supported and challenged this scenario. Here, we analyze 1364 B4a1a1 mitogenomes (234 novel) from 68 islands and compare age estimates with radiocarbon dates for colonization. We estimate the settlement of Remote Oceania ~ 3.2 [2.7; 3.75] ka, matching radiocarbon ages, and then extrapolate the age in Near Oceania. B4a1a1a arose around the northern coasts of New Guinea at least 6 ka, following Early Holocene dispersals from Asia. Technological advances (e.g., in sailing), fueled by interaction networks alongside the arrival of Late Holocene migrants from Taiwan or ISEA and putative environmental changes, likely triggered the expansion of Lapita colonists carrying B4a1a1a from New Guinea into Remote Oceania.
Lapita, Mitochondrial DNA, Molecular clock, Pacific colonization, Polynesian motif
2045-2322
Farr, Helen
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Almeida, Mafalda
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Gandini, Francesca
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Rito, Teresa
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Foody, M. George
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Brandão, Andreia
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Oliveira, Marisa
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Olivieri, Anna
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Fichera, Alessandro
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Oteo García, Gonzalo
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Zainuddin, Zafarina
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Ken Khong, Eng
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Pomat, William
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Bryk, Jarosław
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Pereira, Luísa
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Farr, Helen
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Pala, Maria
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Oppenheimer, Stephen J.
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Richards, Martin B.
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Soares, Pedro
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Farr, Helen
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Almeida, Mafalda
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Gandini, Francesca
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Rito, Teresa
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Foody, M. George
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Brandão, Andreia
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Oliveira, Marisa
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Olivieri, Anna
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Fichera, Alessandro
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Oteo García, Gonzalo
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Zainuddin, Zafarina
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Ken Khong, Eng
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Pomat, William
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Bryk, Jarosław
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Pereira, Luísa
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Farr, Helen
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Pala, Maria
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Oppenheimer, Stephen J.
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Richards, Martin B.
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Soares, Pedro
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Farr, Helen, Almeida, Mafalda, Gandini, Francesca, Rito, Teresa, Foody, M. George, Brandão, Andreia, Oliveira, Marisa, Olivieri, Anna, Fichera, Alessandro, Oteo García, Gonzalo, Zainuddin, Zafarina, Ken Khong, Eng, Pomat, William, Bryk, Jarosław, Pereira, Luísa, Farr, Helen, Pala, Maria, Oppenheimer, Stephen J., Richards, Martin B. and Soares, Pedro (2025) Leveraging known Pacific colonisation times to test models for the ancestry of Southeast Asians. Scientific Reports, 15 (1), [37044]. (doi:10.1038/s41598-025-20856-3).

Record type: Article

Abstract

The most widely accepted model for the colonization of Remote Oceania by Austronesian-speaking bearers of the Lapita complex ~ 3 ka (3000 years ago) links it to a broader Neolithic expansion from China, via Taiwan, ~ 4.5–6 ka. However, analyses of mitochondrial DNA haplogroup B4a1a1a, prevalent among Remote Oceanians today, have both supported and challenged this scenario. Here, we analyze 1364 B4a1a1 mitogenomes (234 novel) from 68 islands and compare age estimates with radiocarbon dates for colonization. We estimate the settlement of Remote Oceania ~ 3.2 [2.7; 3.75] ka, matching radiocarbon ages, and then extrapolate the age in Near Oceania. B4a1a1a arose around the northern coasts of New Guinea at least 6 ka, following Early Holocene dispersals from Asia. Technological advances (e.g., in sailing), fueled by interaction networks alongside the arrival of Late Holocene migrants from Taiwan or ISEA and putative environmental changes, likely triggered the expansion of Lapita colonists carrying B4a1a1a from New Guinea into Remote Oceania.

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s41598-025-20856-3 - Version of Record
Available under License Creative Commons Attribution.
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Accepted/In Press date: 1 October 2025
Published date: 23 October 2025
Additional Information: Publisher Copyright: © The Author(s) 2025.
Keywords: Lapita, Mitochondrial DNA, Molecular clock, Pacific colonization, Polynesian motif

Identifiers

Local EPrints ID: 506625
URI: http://eprints.soton.ac.uk/id/eprint/506625
ISSN: 2045-2322
PURE UUID: abf98bd2-3495-4f3f-bcdf-f013644a28e1
ORCID for Helen Farr: ORCID iD orcid.org/0000-0002-7922-9179
ORCID for Helen Farr: ORCID iD orcid.org/0000-0002-7922-9179

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Date deposited: 12 Nov 2025 17:42
Last modified: 13 Nov 2025 02:42

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Contributors

Author: Helen Farr ORCID iD
Author: Mafalda Almeida
Author: Francesca Gandini
Author: Teresa Rito
Author: M. George Foody
Author: Andreia Brandão
Author: Marisa Oliveira
Author: Anna Olivieri
Author: Alessandro Fichera
Author: Gonzalo Oteo García
Author: Zafarina Zainuddin
Author: Eng Ken Khong
Author: William Pomat
Author: Jarosław Bryk
Author: Luísa Pereira
Author: Helen Farr ORCID iD
Author: Maria Pala
Author: Stephen J. Oppenheimer
Author: Martin B. Richards
Author: Pedro Soares

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