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STED imaging of neuronal morphology

STED imaging of neuronal morphology
STED imaging of neuronal morphology

This chapter explains the basic principle of stimulated emission depletion microscopy (STED), its instrumentation and several recent advancements that have made it a powerful technique well suited to probe neural morphology in a live setting with nanometric spatial resolution. The fundamental idea of STED microscopy is to shrink the size of the focal excitation spot and thereby improve the spatial resolution. Many important neurobiological questions require thick tissue samples such as brain slices or even intact brains. The development of high-power lasers and sensitive SPAD cameras to improve temporal resolution via parallelized scanning schemes, as well as the development of improved switchable nanoprobes and inorganic fluorophores for prolonged time-lapse and multi-color imaging (e.g. with RESOLFT), and the use of adaptive optics in combination with deep-learning techniques, aid in imaging deeper into the brain and achieving isotropic 3D resolution.

Adaptive optics, Inorganic fluorophores, Multi-color imaging, Nanometric spatial resolution, Neural morphology, Stimulated emission depletion microscopy
159-188
John Wiley and Sons Inc
Inavalli, Veera Venkata Gopala Krishna
db7ab576-a272-4f04-b938-3d1772ffbd01
Nägerl, Urs Valentin
e1af6918-c467-4a3f-b946-c87cc7bc9281
Sibarita, Jean-Baptiste
Inavalli, Veera Venkata Gopala Krishna
db7ab576-a272-4f04-b938-3d1772ffbd01
Nägerl, Urs Valentin
e1af6918-c467-4a3f-b946-c87cc7bc9281
Sibarita, Jean-Baptiste

Inavalli, Veera Venkata Gopala Krishna and Nägerl, Urs Valentin (2025) STED imaging of neuronal morphology. In, Sibarita, Jean-Baptiste (ed.) Photonic Imaging for Biology: From Conventional Microscopy to Super-Resolution. John Wiley and Sons Inc, pp. 159-188. (doi:10.1002/9781394417896.ch8).

Record type: Book Section

Abstract

This chapter explains the basic principle of stimulated emission depletion microscopy (STED), its instrumentation and several recent advancements that have made it a powerful technique well suited to probe neural morphology in a live setting with nanometric spatial resolution. The fundamental idea of STED microscopy is to shrink the size of the focal excitation spot and thereby improve the spatial resolution. Many important neurobiological questions require thick tissue samples such as brain slices or even intact brains. The development of high-power lasers and sensitive SPAD cameras to improve temporal resolution via parallelized scanning schemes, as well as the development of improved switchable nanoprobes and inorganic fluorophores for prolonged time-lapse and multi-color imaging (e.g. with RESOLFT), and the use of adaptive optics in combination with deep-learning techniques, aid in imaging deeper into the brain and achieving isotropic 3D resolution.

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More information

Published date: 7 November 2025
Keywords: Adaptive optics, Inorganic fluorophores, Multi-color imaging, Nanometric spatial resolution, Neural morphology, Stimulated emission depletion microscopy

Identifiers

Local EPrints ID: 510324
URI: http://eprints.soton.ac.uk/id/eprint/510324
PURE UUID: eb9bc285-bddd-4883-a39b-0f6f737066a7
ORCID for Veera Venkata Gopala Krishna Inavalli: ORCID iD orcid.org/0000-0002-7100-0214

Catalogue record

Date deposited: 25 Mar 2026 18:01
Last modified: 26 Mar 2026 03:01

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Contributors

Author: Veera Venkata Gopala Krishna Inavalli ORCID iD
Author: Urs Valentin Nägerl
Editor: Jean-Baptiste Sibarita

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