Native-like soluble E1E2 glycoprotein heterodimers on self-assembling protein nanoparticles for hepatitis C virus vaccine design
Native-like soluble E1E2 glycoprotein heterodimers on self-assembling protein nanoparticles for hepatitis C virus vaccine design
Hepatitis C virus (HCV) is a leading cause of chronic liver disease, cirrhosis, and hepatocellular carcinoma worldwide. Development of an E1E2-based HCV vaccine has been hindered by the difficulty of producing a soluble E1E2 (sE1E2) antigen that faithfully recapitulates the native virion-associated heterodimer. Guided by cryo-electron microscopy (cryo-EM) structures, we engineer genotype 1a H77 sE1E2 by truncating the E1 and E2 stems (Cut
1), deleting a putative fusion peptide-containing region in E1 (Cut
2), and stabilizing the heterodimer using diverse scaffolds. All H77 sE1E2.Cut
1+2 scaffolds exhibit native-like E1-E2 association and strong binding to the broadly neutralizing antibody (bNAb) AR4A. A genotype 1a HCV-1 sE1E2.Cut
1+2 variant scaffolded by a modified SpyTag/SpyCatcher (SPYΔN) is selected for in vitro and in vivo characterization, as well as further construct refinement. The structure of this HCV-1 sE1E2 construct in complex with bNAbs is determined by cryo-EM and negative-stain EM (nsEM), with an nsEM-based strategy established for antibody epitope mapping. HCV-1 sE1E2.Cut
1+2.SPYΔN is displayed on self-assembling protein nanoparticles (SApNPs) to enhance immunogenicity. The HCV-1 sE1E2.Cut
1+2.SPYΔN heterodimer and SApNPs bearing wildtype or modified glycans are evaluated in mice, alongside E2 core-based immunogens for comparison. Together, these results establish a framework for advancing E1E2-based HCV vaccines toward clinical development.
He, Linling
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Lee, Yi-Zong
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Zhang, Yi-Nan
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Newby, Maddy L
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Janus, Benjamin M
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Gonzalez, Fabrizio G
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Ward, Garrett
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DesRoberts, Connor
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Hung, Shr-Hau
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Giang, Erick
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Allen, Joel D
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Kulakova, Liudmila
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Toth, Eric A
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Fuerst, Thomas R
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Law, Mansun
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Ofek, Gilad
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Crispin, Max
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Zhu, Jiang
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11 February 2026
He, Linling
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Lee, Yi-Zong
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Zhang, Yi-Nan
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Newby, Maddy L
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Janus, Benjamin M
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Gonzalez, Fabrizio G
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Ward, Garrett
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DesRoberts, Connor
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Hung, Shr-Hau
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Giang, Erick
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Allen, Joel D
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Kulakova, Liudmila
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Toth, Eric A
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Fuerst, Thomas R
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Law, Mansun
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Ofek, Gilad
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Crispin, Max
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Zhu, Jiang
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He, Linling, Lee, Yi-Zong, Zhang, Yi-Nan, Newby, Maddy L, Janus, Benjamin M, Gonzalez, Fabrizio G, Ward, Garrett, DesRoberts, Connor, Hung, Shr-Hau, Giang, Erick, Allen, Joel D, Kulakova, Liudmila, Toth, Eric A, Fuerst, Thomas R, Law, Mansun, Ofek, Gilad, Crispin, Max and Zhu, Jiang
(2026)
Native-like soluble E1E2 glycoprotein heterodimers on self-assembling protein nanoparticles for hepatitis C virus vaccine design.
Nature Communications, 17, [2633].
(doi:10.1038/s41467-026-69418-9).
Abstract
Hepatitis C virus (HCV) is a leading cause of chronic liver disease, cirrhosis, and hepatocellular carcinoma worldwide. Development of an E1E2-based HCV vaccine has been hindered by the difficulty of producing a soluble E1E2 (sE1E2) antigen that faithfully recapitulates the native virion-associated heterodimer. Guided by cryo-electron microscopy (cryo-EM) structures, we engineer genotype 1a H77 sE1E2 by truncating the E1 and E2 stems (Cut
1), deleting a putative fusion peptide-containing region in E1 (Cut
2), and stabilizing the heterodimer using diverse scaffolds. All H77 sE1E2.Cut
1+2 scaffolds exhibit native-like E1-E2 association and strong binding to the broadly neutralizing antibody (bNAb) AR4A. A genotype 1a HCV-1 sE1E2.Cut
1+2 variant scaffolded by a modified SpyTag/SpyCatcher (SPYΔN) is selected for in vitro and in vivo characterization, as well as further construct refinement. The structure of this HCV-1 sE1E2 construct in complex with bNAbs is determined by cryo-EM and negative-stain EM (nsEM), with an nsEM-based strategy established for antibody epitope mapping. HCV-1 sE1E2.Cut
1+2.SPYΔN is displayed on self-assembling protein nanoparticles (SApNPs) to enhance immunogenicity. The HCV-1 sE1E2.Cut
1+2.SPYΔN heterodimer and SApNPs bearing wildtype or modified glycans are evaluated in mice, alongside E2 core-based immunogens for comparison. Together, these results establish a framework for advancing E1E2-based HCV vaccines toward clinical development.
Text
s41467-026-69418-9
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Accepted/In Press date: 30 January 2026
e-pub ahead of print date: 11 February 2026
Published date: 11 February 2026
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© 2026. The Author(s).
Identifiers
Local EPrints ID: 510459
URI: http://eprints.soton.ac.uk/id/eprint/510459
ISSN: 2041-1723
PURE UUID: fac506f3-87b8-43ce-bcad-81ca5c8e6452
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Date deposited: 31 Mar 2026 17:07
Last modified: 01 Apr 2026 02:03
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Contributors
Author:
Linling He
Author:
Yi-Zong Lee
Author:
Yi-Nan Zhang
Author:
Maddy L Newby
Author:
Benjamin M Janus
Author:
Fabrizio G Gonzalez
Author:
Garrett Ward
Author:
Connor DesRoberts
Author:
Shr-Hau Hung
Author:
Erick Giang
Author:
Liudmila Kulakova
Author:
Eric A Toth
Author:
Thomas R Fuerst
Author:
Mansun Law
Author:
Gilad Ofek
Author:
Jiang Zhu
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